Idiomarina sp. X4: CWC33_10425
Help
Entry
CWC33_10425 CDS
T05226
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
idi
Idiomarina sp. X4
Pathway
idi02020
Two-component system
idi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CWC33_10425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWC33_10425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
idi02022
]
CWC33_10425
Two-component system [BR:
idi02022
]
OmpR family
QseC-QseB (quorum sensing)
CWC33_10425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ATZ74078
LinkDB
All DBs
Position
2158508..2159170
Genome browser
AA seq
220 aa
AA seq
DB search
MDLLLIEDDGMLGQAVEIGLSERQFSVQWVRTGAAAISESQRAPYDAVVLDLGLPDLDGS
RVLSALRKKGQLMPVLVLTARDDSSETVKLLDLGADDYMVKPFDMNELAARLRALVRRQR
GQASAELVVGPIRLDEVNFQVLVDEQPINLSRREFELLRALMTSPGRVHSRDKLEQVVFR
NEQQVESNALEVHVHNLRKKLGNKEWIQTIRGVGYRLACK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatctattgttaatcgaggatgacgggatgttgggacaggctgttgaaattggcctg
tctgaacgtcagttttcggtgcagtgggtaaggaccggagcggctgctatcagtgaaagt
cagcgggcgccttatgacgccgttgtactggacctcgggctacccgatttggatggtagc
cgagtgttgtctgcgttacgtaaaaaaggtcagctgatgccagtgttggtattaaccgcg
cgcgatgatagttcggagaccgttaaattgttagacctgggggcggatgactatatggtt
aagcccttcgatatgaatgagctggctgcgcgcttgcgcgcgttggttaggcgtcagcgc
ggacaggcgtcggctgaactggtggttggacctattcgtcttgacgaagttaactttcag
gttttggttgatgaacagccgattaacttatcccgacgtgaatttgagctgttacgcgcg
ttaatgacgtcaccgggacgtgtgcatagccgtgataagttagagcaagtggtgtttcgt
aacgaacagcaagtggaaagcaatgcgttggaagtgcatgtacataatctgcgaaagaaa
ctcggcaataaggagtggattcagaccattagaggggtagggtatcgcctggcatgcaaa
taa
DBGET
integrated database retrieval system
