Idiomarina sp. X4: CWC33_11390
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Entry
CWC33_11390 CDS
T05226
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_11390
Enzymes [BR:
idi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CWC33_11390
DNA repair and recombination proteins [BR:
idi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CWC33_11390
Prokaryotic type
CWC33_11390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Nodulin
Motif
Other DBs
NCBI-ProteinID:
ATZ74263
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All DBs
Position
2351962..2353368
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AA seq
468 aa
AA seq
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MKKAIWFRSDLRTLDNEALYLACQSKSAPEAIFLVCDDTWQRHHWAPIKQDFLWRTLEVL
NEKLAALGIKLHIKNIGKFSKAGGALREFCKTHNINKLYFNAEYALDEKNRDRAVTAVLE
NDGVEVSKHHGNLLIKPGMVKTQQGEYYKKFTPFNKRWRAVLAQEIDVTPFKPNSFPNIN
TEPLPNVLLKTQDSSRYPAGEEAALSKLGQFVGHSVEVYQAGRDRPDQNHTSELSAYLAI
GAISPVTAARALQQFSPEFPYGLPEGPDTWLTELAWREFYQHLIDFEPRLSKGESFQRET
NSIQWRDDEKGFAAWCEGKTGYPIVDAGMRQLNETGWMHNRLRMITANFLVKDLLIDWRK
GEAYFMQNLIDGSFPANNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPQGAYIRKWVKE
LDSVPDKHIHWPHEWLKNRSNTEYYPPIVEHKAARERFLTTFKQVKHG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagcaatttggtttcgcagtgacttgcggacactggacaatgaagcattgtac
cttgcatgtcagtcaaagagtgctcctgaagcgatttttctggtgtgcgatgacacttgg
cagcgtcaccattgggcgccgattaagcaggactttttgtggcgtactctcgaagtgctc
aatgaaaagttggctgcattgggcattaaactccatattaaaaatatcggtaagttttca
aaagcaggtggtgcgcttcgcgaattttgtaaaacgcataatatcaataagctgtatttt
aatgccgaatacgcgctagatgaaaaaaaccgcgacagggcagtaacagcggttttagaa
aatgacggtgttgaggtgagtaagcaccatggcaacctgcttattaagccgggaatggtg
aaaactcagcagggtgagtactataaaaagttcacgccttttaacaagcgctggcgagcg
gttttagctcaagaaatagacgtcacaccgtttaagccgaactcattcccgaacattaac
accgaacctttaccgaacgttttgctgaaaactcaggactcatcacgttatccagcgggt
gaagaggcggctttaagtaagctgggacagtttgtagggcattcggtagaagtttaccag
gctgggcgcgacaggcccgatcaaaatcatacgtcagaactttcagcgtatcttgctatt
ggcgcgatttcaccagtaactgcagccagagcattgcagcagttctcgccggaatttccg
tacgggttaccggaaggtcccgatacctggctgaccgaactggcctggcgcgagttttat
cagcacttaatagactttgagcctagactgtcaaaaggggaaagcttccagcgagaaacc
aacagtatccaatggcgcgatgacgaaaaaggttttgccgcatggtgcgaaggaaagacc
gggtacccgattgttgatgcgggtatgcgtcagctgaatgaaaccggttggatgcataat
cgcctacgtatgataacggctaactttttggtcaaggacttactcattgattggcgcaaa
ggcgaagcttatttcatgcaaaatctaatagacggaagctttccggctaacaacggagga
tggcagtggagcgcgtctgtaggtaccgatgcggtgccttattttcgtgtgtttaacccg
gttaagcagagcgagaagtttgatccgcagggggcctatattcgtaaatgggttaaagag
cttgatagtgtgccggataagcacatccattggccacatgagtggctcaagaataggagt
aatactgagtattatccgccaatcgtcgagcacaaagcggctcgggaacgttttttaaca
acctttaagcaggtgaaacatggataa
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