Idiomarina sp. X4: CWC33_11790
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Entry
CWC33_11790 CDS
T05226
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idi03009
]
CWC33_11790
Enzymes [BR:
idi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
CWC33_11790
Ribosome biogenesis [BR:
idi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWC33_11790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ATZ74339
LinkDB
All DBs
Position
complement(2439844..2440422)
Genome browser
AA seq
192 aa
AA seq
DB search
MQKKRKERPANPKLVLLNKPYGVLSQFSGEADDDTLKSYIPHKDVYPAGRLDKDSEGLLL
LTNDGVYQARLANPKYKVWKTYWVQVEGEPTEEQLEALRNGVELKDGLTRPAEAFIMPEP
NNLWPRNPPIRERKSIPDTWLCIKIREGKNRQVRRMTAHVGLPTLRLIRAAVGPFQLKGL
QPGQWREEPPVW
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaagcgtaaagaacgtcctgcgaaccccaaactggttttgcttaataaacct
tacggtgttctatcgcaatttagtggtgaagctgacgatgataccttaaaaagttatatt
cctcataaggatgtttatcctgccgggcgtctcgacaaagacagcgaaggcttgctgcta
cttaccaacgacggtgtctatcaggcgagacttgcgaaccccaagtataaggtatggaag
acatactgggttcaggtcgaaggcgaaccgactgaagagcaactggaagcacttcgtaac
ggtgttgagctaaaagatggcctaactcgcccagcagaagctttcattatgcctgagccg
aataatttatggcctcgtaacccgcctattagagagcgaaagtcgattccggacacctgg
ctttgcataaaaataagagaaggcaaaaacagacaggtgcgtcgcatgacagcacacgtt
ggcctaccaaccttacgactgataagagccgcagtcggcccctttcagttaaaaggatta
cagccgggacaatggcgtgaagagcctccggtttggtaa
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