Isoptericola dokdonensis: I598_0151
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Entry
I598_0151 CDS
T04384
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I598_0151 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ido03019
]
I598_0151 (rng)
03009 Ribosome biogenesis [BR:
ido03009
]
I598_0151 (rng)
Enzymes [BR:
ido01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I598_0151 (rng)
Messenger RNA biogenesis [BR:
ido03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I598_0151 (rng)
Ribosome biogenesis [BR:
ido03009
]
Prokaryotic type
rRNA processing factors
I598_0151 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ANC29744
UniProt:
A0A161IEF5
LinkDB
All DBs
Position
165242..168760
Genome browser
AA seq
1172 aa
AA seq
DB search
MTSETPEQNDSTTPARRAPRRRATRAAAAPQPTPAPIVVPATPAAEPTPEPTPVPAATEA
PAVETPVEKPARRSRRATRSTTGAAPADAGTPTAPEAPAAATPVTAPAAEEPAVAEPAEE
SAAPAVALDLPVATDPGAATSSTLSLDDIVLPAGPATPAAKAPARGRKRAAAADVEPAEK
AAAPAQEAPAQEAPTKRRRASRGTGAATKAAEVPAAPAETPAADAPAVEDAAEQAPAAQE
APTRSGRAPRGSAAREKKQGGTRRGDVPAPDEQPAGTPRLATTALLFQAPDLSAPRTRRR
APGRAAEAAAPTFAGVSTAGSATEAPDAQPAEKSAAKTGTKAGAKTGAKSSGRSRRASAE
PAREQAPAVTPEDTVAPDPSEGTVAPDPSKEAAAPAEAAVEVETQDAQSLDLTEADEAAV
GEIAEIESELAAEGVELVELGPADFLDDGEETEIRPRRRRRRGGRGRRSGRRPEDDATDD
GHDGADDDESDASADEPVDDQESDTGTTAVEDEGAGTGPVDDADAEGDDEGSSSSRRRRR
RRRGGRTAEREARTPRVDDEIAALKGSTRLEAKRQRRREGRDHGRRRQIITEAEFLARRE
AVNRSMIVREQGGRTQIAVLEDGVLVEHYVSQQAQASMVGNVYLGRVQNVLPSMEAAFVD
VGKGRNAVLYAGEVNWDAAGVEGQPRRIEEALKSGDSVLVQVTKDPIGHKGARLTSQVTL
AGRYLVLVPGGGMTGISRKLPDTERSRLKKILRDVVPDGAGVIVRTAAEGASEEELRADV
ERLQSQWQAISAKAEKSSTSAPALLQGEPDMAIRVVRDIFNDDFSSLVVQGENAWSEISS
YVAELAPDLRERVTRFVESGDVFARHRIDEQLAKGMDRKVWLPSGGSLVIDRTEAMTVVD
VNTGKFTGSGGTLEETVTRNNLEAAEEIVRQLRLRDIGGIIVIDFVDMVLESNRDLVLRR
LVECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLVEAFSSTCEHCKGRGFIVHDEPIERG
GSTGAPAAAEPEAKRSSSRRKRGGRADEQPHGEVPKLPEDESEARKAVKATLATIAAAAA
HAHEHGQEDDAASAAPVEDAAGSTGSPAEVADAAATAPGAEAATTEEPTSDQAQDAPAED
AEPAVAPAPKGAGAEGSPEQADDTDQALTATP
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtccgagacccccgagcagaacgacagcacgacgcccgcacgccgcgcaccgcgc
cgccgtgcgacccgcgccgccgccgcgccgcagccgacccccgcgccgatcgtcgtcccc
gccacgccggccgccgagccgacgcccgagccgacccccgtgccggcggcgaccgaggcc
cccgccgtcgagacccccgtggagaagcccgcgcgtcgttcgcgccgcgccacccggtcg
acgaccggggccgctcccgcagacgccggcacgccgaccgcccccgaggcccccgccgct
gccacgccggtcaccgcgccggccgccgaggagcccgccgtcgcggagcccgccgaggag
tccgcggcccccgcggtcgccctggacctgcccgtcgccaccgaccccggcgcggcgacc
tcgtccaccctgagcctggacgacatcgtgctgcccgcgggacccgccacccccgccgcc
aaggccccggcgcgcggtcgcaagcgcgccgccgccgccgacgtcgagccggccgagaag
gccgccgcaccggcgcaggaggccccggcccaggaggcgccgacgaagcgccgccgcgcc
tcgcgcgggaccggcgccgccacgaaggccgccgaggtcccggcggcgcccgccgagacc
ccggccgcggacgcaccggccgtcgaggacgccgccgagcaggcgcccgccgcgcaggag
gcgccgacccgctccgggcgcgccccgcgcggttccgccgcccgggagaagaagcagggt
ggcacgcggcgcggtgacgtaccggcgcccgacgagcagcccgcgggtaccccgcgcctg
gccacgaccgcgctgctgttccaggcgccggacctctcggcgccccggacgcggcgccgt
gccccgggccgggccgccgaggccgccgcgcccaccttcgccggcgtcagcacggccggg
tccgcgaccgaggcgcccgacgcgcagcccgccgagaagtccgccgcgaagacggggacg
aaggccggtgcgaagaccggcgcgaagtcctccggaaggtcccgccgggcgtcggcggag
ccggctcgcgagcaggcgcccgccgtcacccccgaggacaccgtcgccccggacccgagc
gagggcacggtcgccccggacccgagcaaggaggccgccgcgcccgccgaggccgccgtc
gaggtcgagacgcaggacgcgcagtccctcgacctcaccgaggccgacgaggccgcggtg
ggcgagatcgcggagatcgagtccgagctggccgccgagggcgtcgagctggtcgagctc
gggccggcggacttcctggacgacggcgaggagacggagatccgtccgcgccggcgtcgt
cgtcgcgggggccggggccgccgtagcggccgccgtcccgaggacgacgcgacggacgac
ggccacgacggggcggacgacgacgagtccgacgcctcggccgacgagcccgtcgacgac
caggagtccgacaccggcacgaccgctgtcgaggacgagggggccggcaccggtcccgtc
gacgacgcggacgccgagggtgacgacgaggggtcgtcgtcgagccgtcgtcgtcgccgc
cgtcgtcgtggtggccggaccgccgagcgcgaggcgcgtaccccgcgcgtcgacgacgag
atcgccgcgctcaaggggtcgacccgcctcgaggcgaagcgtcagcgccggcgggagggt
cgcgaccacggccgtcgccggcagatcatcaccgaggcggagttcctcgcccggcgcgag
gccgtcaaccggtcgatgatcgtgcgcgagcagggcgggcgcacgcagatcgccgtgctc
gaggacggcgtgctcgtcgagcactacgtctcccagcaggcgcaggcctcgatggtcggc
aacgtctacctcggccgggtgcagaacgtcctgccgtcgatggaggccgccttcgtcgac
gtcggcaagggccgcaacgccgtgctgtacgcgggtgaggtcaactgggacgccgcgggc
gtcgaggggcagccccgccgcatcgaggaggccctgaagtcgggcgactccgtgctcgtc
caggtcaccaaggaccccatcgggcacaagggtgcccgcctcacgtcgcaggtcaccctc
gcggggcgctacctcgtgctcgtccccggcggcggcatgaccggcatctcgcgcaagctc
cccgacaccgagcgcagccggctgaagaagatcctgcgcgacgtcgtccccgacggcgcg
ggcgtcatcgtgcgcaccgcggcggagggcgcctcggaggaggagttgcgtgccgacgtc
gagcggctgcagtcgcagtggcaggcgatctccgccaaggcggagaagtcgtccacgagc
gccccggcgctgctgcagggcgagccggacatggcgatccgcgtcgtgcgcgacatcttc
aacgacgacttcagctcgctggtcgtccagggcgagaacgcctggtcggagatctcgtcg
tacgtggccgagctcgcccccgacctgcgcgagcgggtcacccggttcgtcgagtccggc
gacgtgttcgcccggcaccgcatcgacgagcagctcgccaagggcatggaccgcaaggtc
tggctgccgtcgggcggctcgctggtcatcgaccgcaccgaggcgatgacggtcgtcgac
gtcaacaccggcaagttcaccggctcgggcggcacgctcgaggagacggtgacccgcaac
aacctggaggcggccgaggagatcgtccgtcagctccggctgcgggacatcggcggcatc
atcgtcatcgacttcgtcgacatggtgctggagtcgaaccgggacctcgtgctgcgccgg
ctcgtcgagtgcctcgggcgggaccgcacgaagcaccaggtcgccgaggtcacgtcgctc
gggctcgtgcagatgacccgcaagcgggtcggccagggcctggtggaggcgttctcctcc
acctgcgagcactgcaagggacgcggcttcatcgtgcacgacgagccgatcgagcgcggt
ggcagcaccggcgccccggccgcggccgagcccgaggccaagcggtcgtcgtcgcgccgc
aagcgcggcggccgtgccgacgagcagccgcacggcgaggtcccgaagctgcccgaggac
gagtcggaggcgcgcaaggccgtcaaggccacgctcgccacgatcgccgccgcggcggcg
cacgcccacgagcacggccaggaggacgacgccgcgtccgcggcgcccgtcgaggacgcc
gccgggtcgaccgggtcgccggccgaggtggccgacgccgccgccacggcccccggggcc
gaggcggccacgacggaggagccgacgtcggaccaggcgcaggacgcgccggccgaggac
gccgagcccgccgtggcgcccgcacccaaaggagccggcgccgaagggtctcctgagcag
gctgatgacacggatcaggcgctgaccgccaccccgtga
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