Isoptericola dokdonensis: I598_0193
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Entry
I598_0193 CDS
T04384
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
ido
Isoptericola dokdonensis
Pathway
ido03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I598_0193 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ido03400
]
I598_0193 (ykoV)
DNA repair and recombination proteins [BR:
ido03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I598_0193 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ANC29784
UniProt:
A0A161IEI4
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All DBs
Position
210765..211607
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AA seq
280 aa
AA seq
DB search
MRAIWKGAVTFGLVNVPVKAYSATEDHDVPLHQVHDADGGRIRYRRVCEVCGETVPFEHI
DKSYDDGEHAVVLTRSDFAALPAESNREIEVVEFVPTDQVDPILFDRTYYLEPDSKSPKA
YVLLRRTLEETDRTAIVKFALRQRTRLAALRVRDEVLALQTLLWADEIREAAFPALDGST
TVSDKELAMSAQLVSSYEADFEPGDYTDDYQVQLRQLIDAKIEQGDTMDPAETFGEQPPE
EDAEVVDLMEALRRSVDSQKKSTKKSSSGSGSSQKRKKTG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgatctggaagggtgccgtgacgttcggcctcgtcaacgtcccggtcaaggcg
tacagcgcgaccgaggaccacgacgtgccgctgcaccaggtgcacgacgccgacggcggt
cgcatccgctaccggcgcgtgtgcgaggtgtgcggcgagaccgtcccgttcgagcacatc
gacaagtcgtacgacgacggtgagcacgcggtggtgctcacgcggtccgacttcgcggcg
ctcccggccgagtcgaaccgggagatcgaggtcgtggagttcgtgcccaccgaccaggtg
gacccgatcctgttcgaccgcacctactacctggagccggactccaagagccccaaggcg
tacgtgctgctgcgccgcaccctggaggagacggaccgcaccgccatcgtgaagttcgcg
ctgcgccagcggacccggctggccgcgctgcgcgtgcgcgacgaggtgctggccctccag
accctgctgtgggccgacgagatccgcgaagccgcgttccccgcgctcgacggctcgacc
accgtgtcggacaaggagctcgccatgtccgcccagctcgtctcgagctacgaggcggac
ttcgagcccggtgactacaccgacgactaccaggtccagctccgccagctcatcgacgcg
aagatcgagcagggcgacacgatggacccggccgagacgttcggcgagcagccgccggag
gaggacgcggaggtcgtcgacctcatggaggctctgcgccggtccgtggactcccagaag
aagtcgacgaagaagtcgtcgtcgggttccggctcgtcgcagaagcgcaagaagaccggc
tga
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