Isoptericola dokdonensis: I598_0950
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Entry
I598_0950 CDS
T04384
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I598_0950 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ido03019
]
I598_0950 (recQ)
03400 DNA repair and recombination proteins [BR:
ido03400
]
I598_0950 (recQ)
Enzymes [BR:
ido01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I598_0950 (recQ)
Messenger RNA biogenesis [BR:
ido03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I598_0950 (recQ)
DNA repair and recombination proteins [BR:
ido03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I598_0950 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANC30522
UniProt:
A0A168EV91
LinkDB
All DBs
Position
989624..992077
Genome browser
AA seq
817 aa
AA seq
DB search
MTSSDDPYADLEPTWTDADVPPDDDVPPPPPEDVPGPVVEDAPVAPARPAAGSPSGAQQA
APRDDRADATRRAKLAMLRGLMDTAGGEGGTLREQATVALRGLVGRDDVELRDDQWRAIE
ALVAFHRRALVVQRTGWGKSAVYFVATSLLRARGAGPTVIVSPLLALMRDQIAAASRAGI
RAVTINSANVTEWDAIHARIAAGEVDVLLCSPERLNNPAFRDEVLPRLAADAGLVVVDEA
HCISDWGHDFRPDYRRIRTLLADLPPGIPVLATTATANERVTRDVAEQLAVPGEGVGGEA
VALATNDDVLVLRGALDRESLHLAVLELRDQPTRVAWLVEALQEIDGSGIVYCLTVSAAE
EVAAQLRTAGLAVASYTGRTDPTQREQLEEDLKENRVKALVATSALGMGFDKPDLAFVVH
LGAPSSPIAYYQQVGRAGRGVDDAVVVLLPGHEDTAIWEWFGSQAFPAEDQVRATLAALT
QTGETMSTATLETYVDLKRSRLETMLKVLDVDGAVRRVQGGWVATGEPWVYDAARYGRVE
ETRHAEQQAMRDYVATDGCRMRFLRAQLDDPALPDGWTCGRCDRCGGVTLPPPPDAETVA
SAREEMDRPGVEVEPRKMWPSGLATLGLDLKGKIPDGERAEVGRAVARFDGLGWSGPVRE
LFAPRTPDGETPAALRTAAARVLDDWSAIRGEAPEDGEAPLLVEGVVAVRSVTRPQLTYH
LANGLASYLGVPLIGAVGPVPGSEEPGRHDVNSAQRLAGVARRLRLELGEGALAGLPGRR
VLLVDDWTESGWTLTVAARLLRQAGAAGVHPFVLGVR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcttccgacgacccgtacgcggacctcgagcccacctggaccgacgcggacgtc
ccgccggacgacgacgtccccccgccgccgccggaggacgtgcccggcccggtcgtcgag
gacgccccggtcgcaccggcgcgtccggcggccggctcgccgtcgggtgcgcagcaggcg
gcgccccgagacgaccgcgccgacgcgacgcgccgggcgaagctcgcgatgctgcgcggc
ctcatggacaccgccggcggcgagggcgggaccctgcgcgagcaggccaccgtcgccctg
cgcggcctggtcggccgcgacgacgtcgagctgcgcgacgaccagtggcgggcgatcgag
gcgctggtcgcgttccaccgccgtgcgctcgtcgtgcagcgcaccggctggggcaagtcg
gcggtgtacttcgtcgcgaccagcctgctgcgggcccgcggtgcgggtccgacggtcatc
gtctcgccgctgctggcgctcatgcgcgaccagatcgccgccgcctcgcgcgccgggatc
cgcgccgtcacgatcaactccgccaacgtcaccgagtgggacgcgatccacgcccggatc
gcggcgggcgaggtggacgtgctgctctgctcccccgagcggctgaacaacccggcgttc
cgcgacgaggtgctgccgcggctcgccgccgacgcgggactcgtcgtcgtcgacgaggcg
cactgcatctccgactggggccacgacttccgccccgactaccggcgcatccgcaccctc
ctggccgacctgccgcccggcatcccggtgctggccaccacggccaccgcgaacgagcgc
gtcacccgggacgtcgccgagcagctcgcggtgcccggcgagggtgtggggggcgaggcc
gtcgccctggccacgaacgacgacgtgctcgtgctccgcggcgccctcgaccgggagtcg
ctgcacctggccgtcctcgagctgcgcgaccagccgacccgcgtggcgtggctcgtggag
gcgctgcaggagatcgacgggtccggcatcgtctactgcctcaccgtgtcggccgcggag
gaggtcgccgcgcagctgcggaccgccggcctcgccgtcgcctcgtacaccggccgcacc
gacccgacgcagcgcgagcagctggaggaggacctcaaggagaaccgcgtcaaggcgctg
gtcgcgacgtcggccctcgggatggggttcgacaagccggacctggcgttcgtcgtgcac
ctcggcgcgccgtcgtcgcccatcgcctactaccagcaggtgggtcgcgccggtcgcggc
gtggacgacgccgtcgtggtgctgctgcccgggcacgaggacaccgcgatctgggagtgg
ttcgggtcgcaggcgttccccgccgaggaccaggtgcgcgccaccctcgcagcgctgacg
cagaccggcgagaccatgtcgaccgccacgctggagacgtacgtcgacctcaagcggtcc
cggttggagacgatgctcaaggtgctggacgtcgacggtgccgtgcgccgcgtccagggc
gggtgggtcgccacgggcgagccgtgggtctacgacgccgcccgctacggtcgcgtcgag
gagacccggcacgccgagcagcaggccatgcgcgactacgtcgcgaccgacggctgccgc
atgcggttcctgcgcgcccagctcgacgacccggcgctgccggacgggtggacgtgcggg
cgctgcgaccgctgcggcggcgtgaccctcccgccgcccccggacgccgagaccgtggcc
agcgcccgcgaggagatggaccgccccggtgtcgaggtggagccccgcaagatgtggccc
tccggtctcgcgacgctcggcctcgacctcaagggcaagatccccgacggcgagcgggcc
gaggtcggccgggccgtcgcgcgcttcgacggcctcggctggtcggggccggtgcgcgag
ctcttcgccccgcggaccccggacggggagacgccggccgcgctgcgcaccgccgcggcc
cgcgtgctggacgactggtcggcgatccgcggcgaggcccccgaggacggcgaggcgccg
ctcctcgtcgagggggtcgtcgccgtgcggtcggtgacccggccccagctcacctaccac
ctggcgaacgggctggcctcctacctgggcgtcccgctcatcggggccgtcggtccggtc
cccggctccgaggagccgggccggcacgacgtcaactccgcccagcggctcgccggggtc
gcccggcgtctgcgcctcgagctcggcgagggcgcgctcgccggcctgcccggccgccgg
gtgctcctcgtcgacgactggaccgagtccggctggaccctgacggtggccgcacggctg
ctgcgccaggccggtgcggccggcgtgcacccgttcgtgctcggcgtgcgctga
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