Isoptericola dokdonensis: I598_1043
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Entry
I598_1043 CDS
T04384
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I598_1043 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ido03019
]
I598_1043 (pnp)
03016 Transfer RNA biogenesis [BR:
ido03016
]
I598_1043 (pnp)
Enzymes [BR:
ido01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I598_1043 (pnp)
Messenger RNA biogenesis [BR:
ido03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I598_1043 (pnp)
Transfer RNA biogenesis [BR:
ido03016
]
Prokaryotic type
tRNA degradation factors
I598_1043 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
ANC30612
UniProt:
A0A168EXM4
LinkDB
All DBs
Position
complement(1091630..1093870)
Genome browser
AA seq
746 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGTRTVRFETGRLARQAAGSVAAYLDGETMLLSATTAGKHPKE
QFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPLFVKGLRNEVQ
VVISVLAMHPDDAYDVLAINAASASTQISGLPFSGPVAGVRIALIDDQWVAFPKHSDLER
AVFNMVVAGRVVQDAAGNADVAIAMIEAEATDDAWNLIKSEGATAPTEEVVAQGIEASKP
FLKALCDAQASLAAQAAKDVKEYPVFLDYQDDAFAAVEAEVTSTLRDALAIADKQDRENR
LDEIKAELVPALADRFEGREKELSAAYRALQKKLIRQRVLTDGVRIDGRGLADIRTLSAE
VEVLPRVHGSALFERGETQIMGVTTLNMLRMEQQIDSLGPVTRKRYMHNYNFPPYSTGET
GRVGSPKRREIGHGALAERAVVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSL
LNAGVPLRAPVAGIAMGLISDTVDGETRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQ
LDTKLDGIPASVLAAALTQARDARLTILEVIAEAIDTPDEMSPNAPRVISVKVPVDKIGE
VIGPKGKMINQIQEETGADISIEDDGTVYIGATDGPSAEAARAAINAIANPHVPEVGERF
VGTVVKTTSFGAFISLSPGKDGLLHISQIRKLVGGKRVENVDDVLSIGQKVQVEIGEIDP
RGKLSLVAVTEDEPATDDATEQPAEA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtggagggacccgagatccagttcgccgaggccgttatcgacaacggccgcttcggcacc
cgcaccgtccgcttcgagacgggccgtctggcccgccaggccgccggctccgtcgccgcc
tacctggacggcgagacgatgctgctgtcggccacgacggccggcaagcaccccaaggag
cagttcgacttcttcccgctgacggtggacgtcgaggagcgcatgtacgccgcgggtcgc
atccccggctcgttcttccgtcgtgagggccgcccctcgaccgaggcgatcctcgcctgc
cgtctcatcgaccgcccgctgcgccccctgttcgtcaagggcctgcgcaacgaggtccag
gtcgtcatctccgtcctggcgatgcacccggacgacgcgtacgacgtcctggcgatcaac
gccgcgtccgcgtccacgcagatctccggcctgccgttctccggcccggtcgcgggtgtc
cgcatcgcgctgatcgacgaccagtgggtcgcgttcccgaagcactccgacctcgagcgc
gccgtgttcaacatggtcgtggcgggtcgcgtcgtgcaggacgccgccggcaacgccgac
gtggccatcgcgatgatcgaggccgaggccacggacgacgcctggaacctcatcaagtcc
gagggcgccaccgcgcccacggaggaggtcgtggcgcagggcatcgaggcctccaagccg
ttcctcaaggcgctgtgcgacgcccaggcctcgctggccgcccaggcggcgaaggacgtc
aaggagtacccggtcttcctcgactaccaggacgacgcgttcgccgccgtcgaggccgag
gtcacgtccacgctgcgcgacgcgctcgcgatcgcggacaagcaggaccgcgagaaccgc
ctggacgagatcaaggcggagctggtccccgccctcgccgaccggttcgagggccgcgag
aaggagctgtcggccgcgtaccgcgcgctgcagaagaagctcatccgccagcgcgtcctc
accgacggcgtgcgcatcgacggccgtgggctcgcggacatccgcaccctgtcggccgag
gtcgaggtgctgccccgcgtgcacggctcggcgctgttcgagcgcggcgagacccagatc
atgggtgtcaccacgctgaacatgctccgcatggagcagcagatcgactcgctcgggccg
gtcacgcgcaagcgctacatgcacaactacaacttcccgccgtactcgaccggtgagacc
ggccgcgtcggttcgccgaagcgccgcgagatcggccacggtgcgctcgccgagcgcgcg
gtggtgccggtgctgccgtcgcgcgaggagttcccctacgcgatccgccaggtgtccgag
gcgctcggctccaacggttcgacctcgatgggctccgtctgcgcgtcgacgctgtcgctg
ctcaacgccggtgtgccgctgcgcgcgccggtcgcgggcatcgcgatgggcctcatctcc
gacacggtcgacggtgagacccgctacgcggcgctcaccgacatcctcggtgccgaggac
gccttcggcgacatggacttcaaggtcgccggcacgagcgagttcgtcacggcgatccag
ctcgacaccaagctggacggcatcccggcgtcggtgctggccgcggccctcacccaggcc
cgcgacgcccgcctgaccatcctggaggtcatcgccgaggcgatcgacaccccggacgag
atgagccccaacgccccgcgcgtcatctcggtgaaggtgccggtcgacaagatcggcgag
gtcatcgggcccaagggcaagatgatcaaccagatccaggaggagacgggcgcggacatc
tccatcgaggacgacggcaccgtctacatcggtgccacggacggcccgtcggccgaggcc
gcgcgcgccgcgatcaacgcgatcgcgaacccgcacgtgccggaggtcggcgagcgcttc
gtcggcaccgtcgtcaagacgacgtcgttcggcgcgttcatctcgctctccccgggcaag
gacggtctgctgcacatcagccagatccgcaagctcgtgggtggcaagcgcgtcgagaac
gtcgacgacgtgctgtccatcggccagaaggtccaggtcgagatcggtgagatcgacccg
cgcggcaagctctcgctggtcgccgtgaccgaggacgagccggccaccgacgacgctacc
gagcagcccgccgaggcctga
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