Isoptericola dokdonensis: I598_1164
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Entry
I598_1164 CDS
T04384
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ido
Isoptericola dokdonensis
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ido03032
]
I598_1164
03400 DNA repair and recombination proteins [BR:
ido03400
]
I598_1164
Enzymes [BR:
ido01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I598_1164
DNA replication proteins [BR:
ido03032
]
Prokaryotic type
DNA Topoisomerases
I598_1164
DNA repair and recombination proteins [BR:
ido03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I598_1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
ANC30731
UniProt:
A0A168F0C5
LinkDB
All DBs
Position
1221769..1222749
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AA seq
326 aa
AA seq
DB search
MRLRRVSVSAPGYARRPKGDGWVFLDPSQVPLTDEVEIARCTRLAVPPAWTDVWICRYAN
GHVQAYGRDDAGRGQYLYHPQWVERRARRKHDHVLEVGRRLPGARRTVTRDLSLPGVPRP
KALALGFRLLDEAYFRAGGEVYARRHRSFGLATIRKEHATVRRDGSVHFRYPAKSGQVRD
TVVEDPVVAEVVSTLKRRRGGVELLAWRERSPAGVVWHDVTSADVQEDVKDRLGDDATPK
DFRTWHATVMTARALAAVEVPSSQRARRRVTTGIVRDVAEELGNTPAVARGSYIDPRLWD
LWERGRTIGPTTSRSAAERAVLELLS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcgccgtgtgtccgtctccgccccgggttacgcccgccgccccaagggtgac
gggtgggtgttcctcgacccctcccaggtgccgttgacggacgaggtggagatcgcccga
tgcacccggctcgccgtgccgcccgcctggacggacgtgtggatctgccggtacgcgaac
gggcacgtccaggcgtacgggcgcgacgacgccggccgagggcagtacctgtaccacccg
cagtgggtggagcggcgggcacgccgcaagcacgaccacgtgctggaggtcgggcggcgt
ctgccgggtgcgcggcgcacggtgacgcgcgacctgtcgctgccgggcgtgccccggccc
aaggcgctggcgctggggttccggctgctggacgaggcgtacttccgggcgggcggcgag
gtctacgcgcgccggcaccgcagcttcgggctggcgacgatccgcaaggagcacgcgacg
gtgcggcgggacgggtcggtccacttccgctacccggcgaagtccggccaggtgcgcgac
acggtggtcgaggacccggtggtggccgaggtcgtgtcgacgctgaagcgtcggcgcggc
ggcgtggagctgctggcttggcgggagaggtcaccggccggcgtggtgtggcacgacgtc
acgagcgcggacgtccaggaggacgtgaaggaccggctgggcgacgacgcgacgccgaag
gacttccggacgtggcacgccaccgtgatgacggcccgggcgctggccgcggtggaggtg
ccgtcgtcgcagcgcgcccgccggcgcgtcacgacgggcatcgtccgggacgtggccgag
gagctgggcaacaccccggcggtggcccgcggctcctacatcgacccgcggttgtgggac
ctgtgggaacggggccgcacgatcggtccgacgacgtcgcggtcggcggccgagcgggcc
gtcctggagctgctgtcatga
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