Isoptericola dokdonensis: I598_2029
Help
Entry
I598_2029 CDS
T04384
Symbol
appA_1
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ido
Isoptericola dokdonensis
Pathway
ido02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I598_2029 (appA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ido02000
]
I598_2029 (appA_1)
Transporters [BR:
ido02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I598_2029 (appA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ANC31572
UniProt:
A0A161HQU0
LinkDB
All DBs
Position
complement(2152615..2154345)
Genome browser
AA seq
576 aa
AA seq
DB search
MHGRTRRQRLLVATALAASVTLLAGACSGGTDEAPETETSETAAGASTDRVLNIWAGSQT
PITANFNPYAVGVLHLANGGIYETLFSYNKVADTAPEPMLGTAFEWNEDGTELTVTLREG
VTWNDGEAFTADDVVYSLTNETAKPVYLTDAVASDDTTVVISFDEPQYANEFAILGSTYI
VPQHVFSQNEDAEDSEAGLTGLVAWTNAESPVGTGPYLVESTSDASYTAVANPDYWGGEP
AVKNLRYLGIDANQSAEDLLATGQIDWATMFVPEPERLESAGLGYINTPVDPTVLYTCSN
VDLGCEGAQTDVAVRQALSAAIDRGAINEKAFVGLAKEISPTFALLGRDDKWIADGMPAA
IEQSADAAGAGEILEAAGYTQGADGFYGKDGKAIELTLTSVDGWTDYNNAAKLIEEQAAE
AGIKVVATTISWNEFADSRTAGEFELIMGGVVGTSIADPYQIYRDWFSTDYTTPVGTALE
PGDWNFARYSDTEVDDAVKAAAATNDEAAKAAAYATVQENIVEDLPYIPLLVNASQTFFN
QTDYTGFPTEEDLYVFPPAWQGPSSGVILGNLAGAE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcacggacgtacccggcgtcagcgcctgctggtcgccaccgcgctcgccgcgagcgtg
accctcctcgcgggcgcctgctccggcggcaccgacgaggccccggagaccgagaccagc
gagacggcggccggcgcgagcaccgaccgcgtcctcaacatctgggcgggctcgcagacc
ccgatcacggcgaacttcaacccgtacgcggtcggcgtcctgcacctcgccaacggcggc
atctacgagaccctgttctcctacaacaaggtcgccgacaccgcgccggagcccatgctg
ggcaccgcgttcgagtggaacgaggacggcaccgagctcaccgtcacgctccgcgagggc
gtgacgtggaacgacggcgaggccttcaccgccgacgacgtcgtctactccctcaccaac
gagaccgccaagccggtgtacctcaccgacgccgtggcctccgacgacacgaccgtcgtc
atcagcttcgacgagccgcagtacgccaacgagttcgcgatcctcggctccacctacatc
gtgccgcagcacgtgttcagccagaacgaggacgccgaggactccgaggcgggcctcacc
ggcctggtcgcgtggacgaacgccgagagcccggtcggtaccggcccgtacctcgtcgag
agcacctccgacgcctcctacaccgccgtcgcgaaccccgactactggggcggcgagccc
gccgtgaagaacctgcggtacctgggcatcgacgccaaccagtccgcggaggacctgctg
gccaccggccagatcgactgggccacgatgttcgtgcccgagccggagcgtctcgagtcc
gcgggcctgggctacatcaacaccccggtcgacccgaccgtcctgtacacctgctcgaac
gtggacctcggctgcgaaggcgcgcagaccgacgtcgccgtccgccaggcgctgtccgcc
gccatcgaccgcggcgcgatcaacgagaaggcgttcgtggggctcgccaaggagatctcc
ccgaccttcgcgctgctcggccgtgacgacaagtggatcgcggacggcatgccagccgcc
atcgagcagtccgccgacgccgcgggcgccggcgagatcctcgaggccgcgggctacacc
cagggcgcggacggcttctacggcaaggacggcaaggccatcgagctgaccctcacctcg
gtggacggctggaccgactacaacaacgccgcgaagctcatcgaggagcaggccgccgag
gccggcatcaaggtcgtcgcgacgacgatctcctggaacgagttcgccgactcccggacc
gccggcgagttcgagctcatcatgggcggcgtcgtcgggacgtccatcgccgacccgtac
cagatctaccgcgactggttctccaccgactacacgacgccggtgggcaccgccctcgag
ccgggcgactggaacttcgcccgctactccgacaccgaggtcgacgacgcggtgaaggcc
gccgccgccaccaacgacgaggccgccaaggccgcggcgtacgccacggtgcaggagaac
atcgtcgaggacctgccgtacatcccgctgctggtcaacgcgtcgcagacgttcttcaac
cagaccgactacacgggcttcccgaccgaggaggacctctacgtcttcccgccggcctgg
cagggcccgtcctccggcgtcatcctcggcaacctcgccggcgccgagtga
DBGET
integrated database retrieval system
