Isoptericola dokdonensis: I598_2471
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Entry
I598_2471 CDS
T04384
Symbol
pel_2
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido00040
Pentose and glucuronate interconversions
ido01100
Metabolic pathways
ido02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I598_2471 (pel_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I598_2471 (pel_2)
Enzymes [BR:
ido01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
I598_2471 (pel_2)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF7113
Motif
Other DBs
NCBI-ProteinID:
ANC32008
UniProt:
A0A161I8F8
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Position
2625002..2626444
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AA seq
480 aa
AA seq
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MRPLVTTRPPAAGRRARRRHPHVAVATAALTIGALAAPLGATAQAAPPAASAPPAAVHDL
TDDAAPTGWATANGGTDGGAGAAASSTYLVSTRAELLAALDNDGRRTEPKVVYVQGVIDG
NERADGTLMGEQDYAPGYDLQKYLSCFTDAGWSDAAHDYCGDQRRKRQTGSNNLKRQTEI
SVPSNTTILGVGADAEVRGATIMLHLAHDVVIRNLTVEAPRDFFTSWDPWDGEQGAWNAR
FDAVSSVTSTNIWLDHVTLTDGRFPDSTAPIGPSGKPVNFHDGLFDLKDGTDFVTMSNSR
VEDHDKAMLIGSGDDNADTDEGRLNVTFVRNAFDGVTQRSPRVRFGKAHVVNNYFRASVN
DPVSPLKPGAGYFIGVGVESQIVSERNVFDYVGPGADASVAVWGAGGAFVDRGSWFRMRP
VDLRSVLPAEITWGVDWDPADVYDYQVLRSPAAVKAHGKHLTGPILPVRAPRGAVVPAVS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccactggtcaccacccgtccccccgccgccgggcgccgtgcccgtcgccggcac
ccgcacgtcgccgtcgccaccgcggcactcacgatcggcgccctcgccgcgccgctcggg
gccaccgcgcaggcggccccgcccgccgcgagcgccccgcccgcagccgtccacgacctc
actgacgacgccgccccgaccgggtgggccaccgcgaacggcggcaccgacgggggcgcg
ggcgctgccgcgtcgagcacctacctcgtgtcgacccgcgccgagctgctcgccgcgctc
gacaacgacggtcggcgcacggagcccaaggtcgtctacgtccagggcgtgatcgacggc
aacgagcgggccgacggcaccctcatgggcgagcaggactacgccccgggctacgacctg
cagaagtacctgagctgcttcaccgatgccggctggagcgacgccgcccacgactactgc
ggggaccagcggcgcaagcgccagaccggcagcaacaacctcaagcggcagacggagatc
tccgtgccgagcaacaccacgatcctcggggtcggggcggacgcggaggtccgcggggcc
acgatcatgctgcacctggcgcacgacgtcgtgatccgcaacctcacggtcgaggcgccc
cgggacttcttcacgagctgggacccgtgggacggcgagcagggcgcctggaacgcgcgg
ttcgacgccgtctcctcggtgaccagcaccaacatctggctcgaccacgtcacgctcacc
gacgggcggttccccgacagcaccgccccgatcggtcccagcggcaagccggtcaacttc
cacgacggcctgttcgacctcaaggacggcaccgacttcgtgacgatgtcgaacagccgg
gtcgaggaccacgacaaggccatgctcatcgggtcgggggacgacaacgccgacaccgac
gagggccggctcaacgtgaccttcgtgcggaacgcgttcgacggcgtcacccagcgctcc
ccgcgcgtgcggttcggcaaggcgcacgtcgtcaacaactacttccgggcgtcggtgaac
gacccggtctcgccgctgaagcccggcgcggggtacttcatcggggtcggcgtggagtcg
cagatcgtctcggagcgcaacgtcttcgactacgtggggccgggcgccgacgcgtccgtg
gccgtctggggcgcgggtggcgcgttcgtcgaccgcggctcctggttccgcatgcgcccc
gtcgacctgcgctcggtgctcccggccgagatcacgtggggcgtggactgggacccggcc
gacgtctacgactaccaggtgctccgttccccggccgccgtgaaggcccacggcaagcac
ctcaccggaccgatcctgcccgtccgggcaccgcgcggcgccgtcgtccccgccgtgtcc
tga
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