Isoptericola dokdonensis: I598_2709
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Entry
I598_2709 CDS
T04384
Symbol
end
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I598_2709 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ido03400
]
I598_2709 (end)
Enzymes [BR:
ido01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
I598_2709 (end)
DNA repair and recombination proteins [BR:
ido03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
I598_2709 (end)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Erythro-docking
Motif
Other DBs
NCBI-ProteinID:
ANC32238
UniProt:
A0A161I8W2
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All DBs
Position
complement(2909433..2910218)
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AA seq
261 aa
AA seq
DB search
MSLQIGAHVSLDDAVAEAGRLQADVVQVFVSDPQSWKVPPLEYDGGAEAFRADVAAAGID
VFVHAPYVINVASPNNRIRIPSRKLLQQVMTRAGEIGAKGVVVHGGHVTAKDDPATGFDN
WRKAIDSLETDVPVLVENTAGGDFSMARRLDRIEQLWAAIQQADGGSDVGFTLDTCHAWA
GGLDLATVVADVTAITGRIDLVHANDSRDAAGSGADRHTNFGVGEIPEDLLVGVVRDAGA
PVICETKGDMGTDIAWLRARL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagatcggtgcccacgtgtccctggacgacgccgtcgcggaggccggccgg
ctccaggccgacgtcgtgcaggtgttcgtctccgacccgcagtcgtggaaggtgccgccg
ctggagtacgacggcggtgccgaggcgttccgcgcggacgtcgcagccgcagggatcgac
gtgttcgtgcacgcgccgtacgtcatcaacgtcgcgtcgccgaacaaccgcatccgcatc
ccgagccgcaagctgctccagcaggtgatgacccgcgcgggcgagatcggcgcgaagggt
gtggtggtgcacggcgggcacgtcaccgcgaaggacgaccccgccaccgggttcgacaac
tggcgcaaggcgatcgactccctcgagacggacgtcccggtgctggtggagaacaccgcc
ggcggcgacttctcgatggcccgccgcctggaccggatcgagcagctgtgggccgcgatc
cagcaggccgacggcgggtccgacgtcggattcaccctcgacacgtgccacgcctgggcc
gggggcctggacctggcgaccgtcgtcgcggacgtcaccgcgatcaccggtcgcatcgac
ctcgtccacgccaacgactcccgcgacgccgccgggtcgggcgccgaccggcacaccaac
ttcggcgtcggcgagatccccgaggacctcctggtcggcgtcgtccgcgatgccggcgcc
cccgtcatctgcgagaccaagggcgacatgggcaccgacatcgcctggctccgcgcccgc
ctctga
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