Isoptericola dokdonensis: I598_2859
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Entry
I598_2859 CDS
T04384
Symbol
pelX
Name
(GenBank) Pectate disaccharide-lyase precursor
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido00040
Pentose and glucuronate interconversions
ido01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I598_2859 (pelX)
Enzymes [BR:
ido01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
I598_2859 (pelX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_5_12
Beta_helix
Pel9A-like_beta_helix
fn3
Motif
Other DBs
NCBI-ProteinID:
ANC32378
UniProt:
A0A161I937
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All DBs
Position
3097304..3101011
Genome browser
AA seq
1235 aa
AA seq
DB search
MTPIGRTLRTSLAALAAAALTLTPAVTASAVGPAGAFDANDLTPGNITADLVVGDFTVKA
TAAKGVTVDASDRTSDRGDVYTQRVKLNGSGDAAQRSLQLTAEGPGEVIVHARSGSGTAD
RALALYDAAWTPLDTAPALADDGSRTITTETLDIPAAGTYWIASPSSGVNLYYAEISDGS
APQRAPWTDVAAPVVDAVEVDPADPSSLLVHYTGLLGEDGADVAHAVLTDAAGAEVDRAF
TATDGTSGTIALSPPSSGTYTVQVELTRSGEADGLVSEPVAAPAFRLPLGAPAVTGALTS
GVSGGQATVTVDWGAVAEAETYSVQTAQGGDFTDAVTGVTGTTADVAGLTPGGVYQVRVV
AHRGTDSTAGEPTEVTVAAAVERWQSADIGSNANSGGSIVENADGTITFDARASSTKLAS
SEDGFQYHYTEIDPETENFTLTATFTVDDAAAKDNQSGFGVLAVDTLTPGVSAARYMNSA
GALITRYGEGTGTVSDGTPGARFVHGYTGAPTDNTAGARDSSDSVVFDETWRSDVATGPK
FATGDVFTLSLRKSNTGYHATWLRDAADGGDVEVIQYDPDMLLQQDGERLYVGMAVARKI
MVTVSDWELTTILPADDEAAQEPPTEYVPATLGVDITSTTPHDSLDIPLVANMYGTGQIL
DAAGDVVVDGVALAPGERALATVELADGVNELTARLLPDAEQPHLGEREEIESTDPVDVP
LTITVKAYGEPGQSLRVAPDGTPDGAGTTADPLDLHTAVGFAQPGQQIVLAGGDYALDRK
VVVERGRDGTPDAPITLMSEPGARATLDLAGSPDGGLVLRGDWWHVYDLEITGSRDKAKP
MLIEGNHNVVERVESHHNADTGIQISGRSAEPPSMWPSHNLVVSSESHNNADPGGNDADG
FGVKLTVGEGNVLRHNIAHHNIDDGWDLYAKSTTGPIGTVIVEDSVAYANGFLEADPSKT
GEGNGFKLGGESMPGDHLLRNSLSYGNLGTGVTSNSGPDVRLRDVTTVSNDRGVRLETNA
ATTAYEATGVISWQNPTVDLLDLQQADTSLLTDPSNHWHLGAGTDVDASWFVSTDETLRP
EIAADGSVEMHGLYELTDAAPADTGARFVPVEDPTVIDVLPEVSAGEPGPAAWYDTAVYV
RGDVVQHDGVVYEARWWTRNQEPGAPGYGPWAEVGPADAAPAVAECAPAWDPRTVYTGGE
IVSFDGLNHRALWWTLRQEPGASVWGAWSAVEACA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgatcgggcggaccctccgcacgtcgctggcagccctggccgccgcggcgctc
accctcacccccgcggtcaccgcgtccgccgtcggaccggcgggcgccttcgacgcgaac
gacctcacccccggcaacatcaccgcggacctcgtggtgggggacttcaccgtcaaggcc
accgccgccaagggcgtgaccgtcgacgcgtcggaccgcacctccgaccgcggcgacgtc
tacacccagcgcgtcaagctcaacggctccggcgacgccgcccagcgctccctgcagctc
accgccgagggccccggcgaggtgatcgtccacgcccgcagcggcagcggcaccgccgac
cgcgcgctcgcgctctacgacgccgcgtggacgccgctggacaccgcgccggcgctcgcc
gacgacggcagccgcaccatcaccaccgagaccctcgacatcccggccgccgggacgtac
tggatcgcgtccccgagctcgggcgtcaacctctactacgccgagatcagcgacggctcc
gcgccgcagcgcgccccgtggaccgacgtcgccgcacccgtcgtggacgccgtcgaggtc
gacccggccgacccgtcgagcctgctcgtgcactacacgggtctgctcggcgaggacggc
gccgacgtcgcgcacgccgtcctcacggacgccgcgggcgccgaggtggaccgcgcgttc
accgcgaccgacggcacctccggcacgatcgcgctgtccccgccgtcgtccggcacctac
accgtgcaggtcgagctcacccgctccggggaagccgacggcctcgtctccgagcccgtg
gccgcccccgcgttccggctgcccctcggtgcgcccgccgtgaccggggcgctgacctcc
ggcgtgagcggcggccaggccaccgtcaccgtcgactggggcgccgtcgccgaggccgag
acctactcggtgcagaccgcccagggtggcgacttcacggacgccgtcaccggcgtcacc
ggcaccaccgcggacgtcgccggcctcacgccgggcggcgtctaccaggtgcgcgtcgtc
gcccaccgcggcaccgactccaccgcgggcgagccgaccgaggtcaccgtggccgccgcc
gtcgagcgctggcagtccgccgacatcggctccaacgcgaactccggcgggtcgatcgtc
gagaacgccgacggcaccatcacgttcgacgcgcgcgccagctcgaccaagctcgcctcc
tccgaggacgggttccaataccactacacggagatcgaccccgagacggagaacttcacg
ctcaccgcgacgttcaccgtggacgacgccgccgcgaaggacaaccagtccggcttcggc
gtgctcgccgtcgacaccctcacccccggcgtctccgccgcccgctacatgaactccgcg
ggcgccctcatcacccgctacggcgagggcaccggcaccgtgagcgacggcacccccggc
gcgcggttcgtgcacgggtacaccggcgcaccgaccgacaacaccgccggggcgcgcgac
tcctccgactcggtcgtcttcgacgagacgtggcgctccgacgtcgcgaccggccccaag
ttcgccaccggcgacgtgttcacgctcagcctgcgcaagtcgaacaccggctaccacgcg
acctggctgcgtgacgccgccgacggcggggacgtcgaggtcatccagtacgaccccgac
atgctgctccagcaggacggcgagcgcctctacgtcggcatggccgtcgcccgcaagatc
atggtgacggtctccgactgggagctcaccacgatcctgccggccgacgacgaggccgcc
caggagccgccgaccgagtacgtcccggcgaccctcggcgtcgacatcacctcgacgacg
ccgcacgacagcctcgacatccccctcgtcgcgaacatgtacggcaccgggcagatcctc
gacgccgccggtgacgtcgtcgtcgacggcgtcgcgctcgctcccggcgagcgggcgctc
gccaccgtggagctggccgacggcgtcaacgagctcaccgcgcggctcctcccggacgcc
gagcagccgcacctcggcgagcgggaggagatcgagtccaccgacccggtcgacgtgccg
ctcaccatcacggtgaaggcgtacggcgagcccggccagtccctccgggtcgcgcccgac
ggcacccccgacggcgccggcaccaccgccgacccgctcgacctgcacaccgccgtgggc
ttcgcccagcccggccagcagatcgtgctcgccggcggcgactacgccctcgaccgcaag
gtcgtcgtcgagcgcggccgcgacggcacgcccgacgcgcccatcacgctcatgtccgag
ccgggggcccgcgcgaccctcgacctcgccggttcgcccgacggcggactcgtgctccgc
ggcgactggtggcacgtctacgacctggagatcaccgggtcgcgcgacaaggccaagccg
atgctcatcgagggcaaccacaacgtcgtcgaacgcgtcgagtcgcaccacaacgccgac
accggcatccagatctccggccgcagcgccgagccgccgtcgatgtggccgtcgcacaac
ctcgtcgtgtcctccgagtcgcacaacaacgccgacccgggcggcaacgacgcggacggg
ttcggcgtcaagctcaccgtcggcgagggcaacgtgctgcggcacaacatcgcccaccac
aacatcgacgacggctgggacctctacgccaagtcgaccaccggacccatcggcaccgtg
atcgtcgaggactccgtcgcgtacgccaacgggttcctcgaggccgacccgagcaagacg
ggcgagggcaacgggttcaagctcggcggcgagtccatgccgggcgaccacctgctgcgc
aactcgctcagctatggcaacctcggcaccggcgtcacgtcgaactccgggcccgacgtc
cggctgcgcgacgtcaccaccgtcagcaacgaccgcggcgtccgcctcgagaccaacgcc
gccaccacggcgtacgaggcgaccggcgtcatctcctggcagaaccccaccgtcgacctg
ctcgacctccagcaggccgacacctccctgctgaccgacccgtcgaaccactggcacctc
ggcgccgggaccgacgtcgacgcctcctggttcgtctccaccgacgagaccctgcgcccc
gagatcgccgccgacggatccgtcgagatgcacgggctctacgagctgaccgacgccgca
ccggccgacacgggcgcacgcttcgtgcccgtcgaggacccgaccgtcatcgacgtcctg
cccgaggtctccgccggcgagcccggccccgccgcctggtacgacaccgccgtgtacgtg
cgtggcgacgtcgtccagcacgacggcgtcgtctacgaggcccgctggtggacccgcaac
caggagcccggtgcccccggctacgggccgtgggcggaggtcggccccgccgacgccgcc
cccgccgtcgccgagtgcgcccccgcctgggacccgcggaccgtctacaccggcggagag
atcgtctccttcgacggcctcaaccaccgcgccctgtggtggacgctccgccaggagccg
ggtgcctccgtctggggtgcctggtcggcggtcgaggcctgcgcctga
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