Isoptericola dokdonensis: I598_3112
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Entry
I598_3112 CDS
T04384
Symbol
pelA_2
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido00040
Pentose and glucuronate interconversions
ido01100
Metabolic pathways
ido02020
Two-component system
ido02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I598_3112 (pelA_2)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I598_3112 (pelA_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I598_3112 (pelA_2)
Enzymes [BR:
ido01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
I598_3112 (pelA_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
I598_3112 (pelA_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ANC32627
UniProt:
A0A161IGC6
LinkDB
All DBs
Position
complement(3366446..3368479)
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AA seq
677 aa
AA seq
DB search
MRHRHTARLVAAAGAPLLALTLLAPGAQAAEADSPDPAAAGSALLDRIGAPGTTTVDGPV
WSPVATGFASTATDDLPHGTTGGAGGRTVVVRDADQLAEQAASAGPLTILVRGEIVVGDG
DMIEVASDKTIAGIGRDPEIVDGGLFLDEVSNVIVRNLTFRDSYVAGDWDGKDPDNDNDG
IRLDTSSHVWIDHNEFTRLGDGQVDVRKDSTAVTLSWNQFRDHNKTVGVGWTDNVVTTIT
MHHNEFSNTFQRNASIDNVAAGHLYNNWFSGQTHYGTMSRGASQLVVESSVYEHGEDAIV
AKDPASRVDSRDNRFTNIRGRKDDTGPTFDPSTFYPYDADPVGTVAALVGAHAGPLGRDE
TVKRRVTVALDGTGDYASIGAAVGAASRAAHPVEVVVAPGVYREVVRIWPGTDDLTIRGA
TRDAQDVVISYDLAAGQTKFYGGTWGHTGSPTVSVLADDVTLRDVTIENAYDEAANGGSQ
ALALRTSGDRIVLDGVRLLGNQDTYLADPGSKPTPSRVWMTDSYVEGDVDFVYGGGTLVV
EDSRIHSLDRGQEVNGYVAAPATVPGGRGFLFVDSRFTSDAAAGSVFLGRPWHPSSNPLV
EPSMVVRDSWLGAHVGTPAWSDMSGWAWEDDFLREHRNDGPGAGTGDGRPQLSRAEAREH
TREAYLSGADRWRPWRG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagacaccgtcacaccgcccgcctggtggccgccgccggcgcaccgctgctcgcactc
accctgctcgcccctggcgcgcaggccgcggaggccgactcccccgacccggccgcggcc
ggcagcgcgctgctggaccgcatcggcgcgcccggcaccaccaccgtcgacggccccgtc
tggtcgcccgtcgcgaccggcttcgcctccaccgcgacggacgacctcccgcacggcacg
accggcggcgcgggcggacgcaccgtcgtcgtgcgcgacgccgaccagctcgccgagcag
gccgcgtcggccgggccgctgaccatcctcgtccggggcgagatcgtggtcggcgacggc
gacatgatcgaggtcgcctcggacaagaccatcgccgggatcgggcgcgaccccgagatc
gtcgacggcgggctcttcctcgacgaggtctccaacgtcatcgtccgcaacctgacgttc
cgcgactcgtacgtcgccggtgactgggacggcaaggaccccgacaacgacaacgacggc
atccgcctcgacacgtcctcccacgtgtggatcgaccacaacgagttcacccggctcggc
gacggccaggtcgacgtccgcaaggactccaccgccgtgacgctgtcctggaaccagttc
cgcgaccacaacaagacggtcggcgtcggctggaccgacaacgtcgtcacgacgatcacg
atgcaccacaacgagttctcgaacacgttccagcgcaacgccagcatcgacaacgtcgcg
gccgggcacctgtacaacaactggttctccggccagacccactacggcacgatgtcgcgc
ggcgcgtcgcagctcgtcgtcgagtcgagcgtgtacgagcacggcgaggacgcgatcgtc
gcgaaagaccccgcctcccgcgtcgactcgcgcgacaaccggttcacgaacatccgcggc
cgcaaggacgacaccggcccgaccttcgacccgtcgaccttctacccgtacgacgccgac
cccgtgggcacggtcgccgctctcgtcggcgcgcacgcgggcccgctcggccgggacgag
acggtgaagcgtcgcgtcaccgttgccctggacggcacgggcgactacgcgagcatcggc
gcggccgtcggcgccgcgtcccgcgccgcccaccccgtcgaggtcgtggtggccccgggc
gtgtaccgcgaggtggtgcgcatctggcccggcaccgacgacctgacgatccgtggtgcg
acccgtgacgcgcaggacgtggtgatcagctacgacctcgcggcggggcagaccaagttc
tacggcggcacctgggggcacaccgggtcccccaccgtgtcggtgctcgccgacgacgtc
accctgcgggacgtcacgatcgagaacgcctacgacgaggccgcgaacggcggcagccag
gcgctcgcgctgcgcacgtccggcgaccgcatcgtgctggacggcgtccgcctgctcggc
aaccaggacacctacctggcggacccgggctcgaagccgacgccgtcgcgcgtgtggatg
accgactcctacgtcgagggcgacgtcgacttcgtctacggcggcggcacgctcgtcgtg
gaggactcgcggatccactcgctcgaccgcggccaggaggtcaacggctacgtcgcggct
ccggcgaccgtgcccggcggccgggggttcctcttcgtggactcccggttcacctcggac
gcggccgccgggtcggtgttcctcggccgtccgtggcaccccagcagcaacccgctggtg
gagccgtcgatggtggtgcgggactcgtggctgggtgcgcacgtcggcaccccggcctgg
tcggacatgagcggctgggcgtgggaggacgacttcctgcgcgagcaccgcaacgacggg
cccggcgccgggaccggcgacggccgcccgcagctctcccgcgccgaggcccgcgagcac
acgcgcgaggcgtacctgtccggcgccgaccgctggcgcccctggcggggctga
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