Isoptericola dokdonensis: I598_3113
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Entry
I598_3113 CDS
T04384
Symbol
pelA_3
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido00040
Pentose and glucuronate interconversions
ido01100
Metabolic pathways
ido02020
Two-component system
ido02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I598_3113 (pelA_3)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I598_3113 (pelA_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I598_3113 (pelA_3)
Enzymes [BR:
ido01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
I598_3113 (pelA_3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
I598_3113 (pelA_3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pectinesterase
NosD
Motif
Other DBs
NCBI-ProteinID:
ANC32628
UniProt:
A0A161I9I3
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All DBs
Position
complement(3368476..3370056)
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AA seq
526 aa
AA seq
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MPFVPVRHPRSGPPRRPPGRARRARRWTAALGVPTLALTLLAPAAQAAPAATEAPRSAHV
TAGHETAGHELLRRLHAPRTTTADGPVWSPVATGFASTATDDLPHGTTGGAGGRTVVVRD
AAALAEQAAAEGPRTILVDGTIEIGDGDMIEVASDKTIAGAASGGELVDGGLFLDRVSNV
VVRNLTFRDSYVAGDWDGKASDNDNDGIRIDTSSHVWIDHNEFTRLGDGQVDVRKDSTAV
TLSWNHFRDHNKTVGVGWTDDVVTTITLHHNRFTNVHQRNASLDNVAAGHVYNNWLSGVS
SYGMNARGGAQVLVEASVFEHARKPLIADDGGHVHQRGNVFRDVWGEAPAETGPTFEASD
HYSYRLDDVRAVPRLLSRHAGPVVGTAERAARRVVVAQDGAGDFLSIHAAVGAAARTPHP
VEIVVRPGTYREVVTLWPGADRLTVRGATGDPSDVVVTYDKPDSDWANTPTLTVLADRVT
LRDLTLANTYDGAAGPSPAYALRDAGERTVLRDVVVLGDTTEGDPR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcgtccccgtccgacacccccgctccgggccaccccgccggccccccggccgt
gcccgtcgcgcccggcggtggaccgccgccctcggcgtgccgaccctcgcgctgaccctc
ctcgccccggccgcgcaggcggcccccgcggcgaccgaggccccgcgcagcgcccacgtg
accgccggtcacgagaccgccggtcacgagctgctgcgccggctccacgccccccggacg
acgaccgccgacggccccgtctggtcgcccgtcgccaccggcttcgcctccaccgcgacg
gacgacctgccgcacggcacgaccggcggcgcgggcggacgcaccgtcgtcgtgcgggac
gcggccgcgctcgccgagcaggccgccgccgagggaccccggacgatcctcgtcgacggc
acgatcgagatcggcgacggcgacatgatcgaggtcgcctccgacaagaccatcgccggt
gccgcgtcgggcggcgagctcgtcgacggcgggctcttcctcgaccgggtctccaacgtg
gtcgtccgcaacctgacgttccgcgactcgtacgtcgccggcgactgggacggcaaggcg
tcggacaacgacaacgacggcatccgcatcgacacctcgtcccacgtgtggatcgaccac
aacgagttcacccggctcggcgacggccaggtcgacgtccgcaaggactccaccgccgtc
accctgtcctggaaccacttccgcgaccacaacaagaccgtcggcgtcggctggaccgac
gacgtcgtcacgacgatcacgctgcaccacaaccggttcaccaacgtgcaccagcgcaac
gccagcctggacaacgtcgcggccgggcacgtgtacaacaactggctctcgggcgtcagc
tcgtacgggatgaacgcccgcggcggggcccaggtgctcgtcgaggccagcgtgttcgag
cacgcccgcaagccgctcatcgcggacgacggcggccacgtgcaccagcgcggcaacgtg
ttccgcgacgtgtggggcgaggcgcccgccgagaccgggcccacgttcgaggcctcggac
cactactcctaccggctcgacgacgtccgtgcggtcccgcggctgctgagccgccacgcg
ggtccggtcgtcggcacggcggagcgggcggcgcggcgggtcgtcgtcgcccaggacggc
gccggcgacttcctgtcgatccacgcggcggtgggtgcggccgcccgcaccccgcacccc
gtcgagatcgtcgtccgccccggcacctaccgcgaggtggtgaccctctggccgggtgcc
gaccggctgacggtccggggcgcgaccggcgacccgtccgacgtcgtcgtcacctacgac
aagcccgacagcgactgggcgaacacccccaccctgaccgtcctcgcggaccgcgtcacc
ctgcgcgacctgaccctcgccaacacctacgacggcgcggccggtccgagccccgcctac
gccctgcgcgacgccggtgagcgcaccgtcctgcgcgacgtcgtcgtcctcggcgacacg
accgaaggagacccccgatga
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