Isoptericola dokdonensis: I598_3417
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Entry
I598_3417 CDS
T04384
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ido
Isoptericola dokdonensis
Pathway
ido03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I598_3417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ido03021
]
I598_3417
03019 Messenger RNA biogenesis [BR:
ido03019
]
I598_3417
Transcription machinery [BR:
ido03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I598_3417
Messenger RNA biogenesis [BR:
ido03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I598_3417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
ResIII
DUF7440
Motif
Other DBs
NCBI-ProteinID:
ANC32925
UniProt:
A0A161I3U3
LinkDB
All DBs
Position
3721574..3723487
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AA seq
637 aa
AA seq
DB search
MTNSTDNLSSMKLAELQAMASEMGVKGTSRMRKGDLADAIRSRRGGSSSAPAEGSAPRRR
ATSEPAVAPVAAATAEAPTLRTDAATEAPQRRQRRAVRPTGDAPAAATEGRASGEQQQKR
QAPPREEREARLAELAEAVAAPRERGPRQDQGAGRHPQDGDERSGDRENGRQSGNQQGGQ
GNQSGQGNQGGNQQGGQGLRDDDRGSRRRRGRDRGRDRKRNRGGRPGAPDVGVEEVEVRE
DDVLIPVAGILDIHDNYAFVRTSGYLPGANDVYVTMNQVKKAGMRRGDAVVGAIRQPREG
EEPLTGGSQKNPRGKFAALVRLDTVNGMVPDEARQRPEFNKLTPLYPQDRLRLENPEATR
LTPRVIDIVAPIGKGQRGLIVAPPKAGKTIIMQQIANAITSNNPEVHLMVVLVDERPEEV
TDMERTVKGEVIASTFDRPASDHTVVAELAIERAKRLVELGQDVVVLLDSITRLSRAYNL
AAPASGRILSGGVDAAALYPPKRFFGAARNIENGGSLTILGSALVETGSKMDEVIFEEFK
GTGNMELRLSRNLADKRIFPAVDVNASGTRREEILMSKDELGIVYKLRRVMGALDQQQAI
ELLLGKLKDTRTNVEFLLQVQKTTPAGLTTDRPGETI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacagcaccgacaacctcagctcgatgaagctcgccgagctgcaggccatggcg
tccgagatgggcgtcaagggaaccagccgcatgcgcaagggcgacctcgccgacgcgatc
cgctcgcgtcgcgggggttcgtcctccgcgccggccgagggctccgccccgcgccgccgt
gcgacgagcgagcccgccgtggcgccggtcgccgcggccaccgccgaggcaccgaccctg
cggaccgacgccgccaccgaggcgccacagcgccggcagcggcgcgccgtccggccgacc
ggcgacgcgccggcggccgcgaccgaggggcgcgcctccggcgagcagcagcagaagcgg
caggccccgccgcgcgaggagcgcgaggcgcggctcgccgagctggccgaggcggtggcc
gcaccgcgcgagcggggcccgcgccaggaccagggcgccggccgccacccgcaggacggg
gacgagcgctccggcgaccgcgagaacggccggcagtccggcaaccagcagggcgggcag
ggcaaccagtccggccagggcaaccagggcggcaaccagcagggcggccagggcctgcgg
gacgacgaccgtggctcgcgccgccgtcgcggccgtgaccgtggtcgggaccgcaagcgc
aaccgcggcggccgccccggcgccccggacgtcggcgtggaggaggtcgaggtccgtgag
gacgacgtcctcatccccgtcgccggcatcctcgacatccacgacaactacgcgttcgtg
cgcaccagcggctacctgccgggcgccaacgacgtctacgtgacgatgaaccaggtcaag
aaggccggcatgcgtcgtggtgacgcggtcgtcggcgcgatccgccagccgcgcgagggc
gaggagccgctcaccgggggctcgcagaagaacccgcgcggcaagttcgccgcgctggtc
cgcctggacaccgtcaacggcatggtgcccgacgaggcgcggcagcgtcccgagttcaac
aagctcacgccgctgtacccgcaggaccggctgcgcctggagaaccccgaggcgacccgc
ctgacgccgcgcgtcatcgacatcgtcgcgccgatcggcaagggccagcgcggcctcatc
gtcgcgccgcccaaggccggcaagacgatcatcatgcagcagatcgccaacgcgatcacg
tcgaacaaccccgaggtccacctcatggtggtcctggtcgacgagcggcccgaagaggtc
acggacatggagcggacggtcaagggcgaggtcatcgcctcgacgttcgaccgccccgcg
tcggaccacacggtcgtcgccgagctcgcgatcgagcgcgccaagcgtctcgtcgagctg
ggccaggacgtcgtggtgctgctcgactcgatcacccgcctctcgcgtgcctacaacctg
gccgcgccggcgtcgggccgcatcctgtccggtggtgtggacgcggcggcgctctacccg
ccgaagcgcttcttcggtgccgcccgcaacatcgagaacggcggctcgctgaccatcctc
ggctccgcgctcgtcgagacgggctcgaagatggacgaggtgatcttcgaggagttcaag
ggcaccggcaacatggagctgcggctgtcccgcaacctcgccgacaagcggatcttcccg
gcggtggacgtcaacgcgtccggcacccgccgcgaggagatcctcatgtcgaaggacgag
ctgggcatcgtctacaagctccgccgcgtcatgggcgccctcgaccagcagcaggcgatc
gagctgctgctcggcaagctgaaggacacccgcacgaacgtcgagttcctcctccaggtg
cagaagacgacgccggccggtctgaccaccgaccgccccggcgagacgatctga
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