Idiomarina sp. PL1-037: U0358_01895
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Entry
U0358_01895 CDS
T10248
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
idp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0358_01895 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U0358_01895 (uvrA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQC53330
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Position
complement(397678..400503)
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AA seq
941 aa
AA seq
DB search
MDTIEVRGARTHNLKNFNLTIPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGEPRC
PTHDVPLAAQTVSQMVDNVLAAPEGEKRMLLAPIIQNRKGEHLKVLENLALQGYIRARID
GEICDLSDPPTLELQKKHTIEVVVDRFKVREGMEQRLAESFETALELSGGTALVVPMDGD
GDAEVYSANFACPHCGYSMQELEPRLFSFNNPAGACTTCDGLGVEQFFDPAKVVVNAELS
LTGGAIRGWDKRNFYYYQMLQSLAKHYEFKLSQPFNELPDNIREKILFGSGKEEIKFTYM
NDRGDKVVRAHPFEGIIPNMQRRYRETESQAVRDELSKYVATQPCKSCGGTRLRTEARHV
FIQGTTLPEVVAQSIGDALEFFQQLNLEGQRAQIAEKILKEINDRLRFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNTV
IVVEHDEDAIRQADHVIDIGPGAGVHGGEIIAQGQVDDIVGSKDSLTGDYLSGRKEIEIP
KQRHKPDKRRLTIHGASGNNLKNVDFNLPLGIMTCVTGVSGSGKSTLVNNTLFHIAHREL
NGATTGEPAPYKSVDGMQLLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPESR
ARGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDICKGQRYNRETLEVQYKG
KNIHEVLDMTIEDAREFFEPVPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKLSR
ELSKRDTGKTLYILDEPTTGLHFHDIKQLLAVIHRLRDHGNTVVVIEHNLDVIKTADWII
DLGPEGGSGGGEILCEGTPEDICENERSHTARFLKPMLTQS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggatactatcgaagtacgcggtgcgcgcacgcacaacttaaaaaatttcaatctgact
atcccccgcaataagttgattgtgataaccggcttatccggttcgggtaagtcatcactt
gctttcgataccctatatgcagaggggcagagacgctatgttgagtcgctgtctgcctat
gcacgtcagtttttgtcgctgatggaaaagcctgatgttgacagtatcgagggtttgtct
ccggctatatcgatagagcagaagtcaacgtcgcataatccgcgttcgacggtcggtacc
attacggaaatttacgactatttacgtctgatgttcgcccgggtgggtgaaccccgctgc
ccgactcacgacgtaccgctggcggcgcaaaccgtatcgcagatggtcgataacgtgctg
gcggctcctgagggcgaaaagcgtatgttgcttgcgcccattattcagaaccgtaaaggc
gaacatttaaaagtgttagaaaacctcgccttgcaaggttatatccgcgctcgtatagac
ggtgagatatgcgatttaagcgatcctcctacattagagctgcagaaaaaacataccatt
gaagtggtggttgaccgctttaaagttcgcgaaggtatggagcagcgtctggccgaatct
tttgaaaccgcactggaactcagtggcggaacggctttagtggtacctatggacggcgac
ggtgatgccgaagtgtactcggcaaactttgcctgcccgcattgtggttacagcatgcag
gaactggagccacggttgttttcgttcaacaatccggctggcgcctgcaccacttgtgac
ggtctgggtgtcgagcagttttttgatccggccaaagttgttgttaatgcagaactgtcg
ctgacaggcggtgcaattcgcggctgggacaagcgtaatttctactactaccaaatgctg
cagtctctggcgaaacactacgagtttaaattgtcgcagccttttaacgaattacccgat
aatattcgcgaaaagattctgttcggcagcggtaaagaagaaataaagttcacatacatg
aacgaccgcggcgacaaagtggtcagagcgcatccgtttgagggaattattcctaacatg
cagcgccgttaccgcgagactgaatcacaggctgtgcgcgacgagttgtccaaatatgta
gcgacacaaccctgtaaaagctgcggtggtacgcgtttacgcactgaagcacgtcatgtg
tttattcagggcacgaccctgccggaagttgttgcccaatccattggcgacgcacttgaa
ttcttccagcaactgaatctggagggtcagcgcgcgcaaattgcagaaaaaattctgaaa
gaaattaatgaccgcctgcgctttttagtgaacgtaggacttaactatttaagtttgtcc
cgcagcgcagaaaccttgtccggtggtgaggcgcaacgtattcgtctggccagccaaatt
ggtgcgggtctggttggtgttatgtacgtactggatgagcccagtattggcttgcaccag
cgcgacaacgaacggctgttaaacactctgacgcacctacgtgacctgggtaacaccgtc
attgtggttgaacacgatgaagacgcgatccgtcaggccgaccacgttattgatatcggt
cctggcgccggcgtacatggcggtgaaattatcgctcaaggccaagtcgatgacattgtc
ggaagtaaagactcattaaccggcgattacctgtccggcagaaaagaaatagaaataccg
aagcaacgccacaaacctgacaagcgccggttaaccattcatggagccagcgggaacaac
ctgaagaacgtcgatttcaatttaccattaggtattatgacctgtgtgaccggagtatcc
ggttcaggtaagtcgactctggttaacaacacgctgttccatattgcgcaccgtgaactt
aacggcgcgacaacgggcgaaccggctccttacaaaagtgtcgatggcatgcaactgctg
gataaagtggtggatattgaccaaagcccaataggccgtacgccgcgctctaacccggca
acgtacaccggtattttcacgcccattcgcgaactgttcgcaggagttccggaatcacga
gcccgaggttacaagccgggccgcttcagctttaatgtgcgcggcggtcgttgcgaggct
tgccagggcgacggagtgattaaggttgaaatgcactttttgccggacgtttatgtccct
tgcgatatttgtaagggtcagcgttataaccgcgaaacgctggaagtacagtataaaggt
aaaaatattcacgaagtgctggatatgaccattgaagatgctcgagaattcttcgagccg
gttccggctattgcacgcaagttgcaaaccttaatggatgtaggcttgtcttacgtccgt
ttaggccagtcagcgacaacactctccggtggtgaagcgcaacgggtcaaattgtcacgt
gagttgtccaagcgtgataccggcaaaaccttatacattctggacgagccgacaaccggt
ctgcatttccacgacattaagcagttgctggcagtgattcaccgtttgcgtgatcacggc
aacacggtcgtggttattgagcacaacttagacgtgataaaaaccgctgactggatcatc
gacttaggccctgaaggtggttctggcggtggtgaaatcctctgcgaaggcacaccagaa
gatatttgtgaaaatgagcgctcacacacggcccgtttcttaaaacctatgcttacacaa
tcttaa
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