Idiomarina sp. PL1-037: U0358_02625
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Entry
U0358_02625 CDS
T10248
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0358_02625 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
idp03019
]
U0358_02625 (rppH)
Messenger RNA biogenesis [BR:
idp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
U0358_02625 (rppH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
SAMP2
Motif
Other DBs
NCBI-ProteinID:
WQC53467
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All DBs
Position
551496..552008
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AA seq
170 aa
AA seq
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MIDAEGFRANVGIVICNGHGQVFWARRINQQSWQFPQGGIHEGETPEQAMYRELYEEVGL
KPEQVEILYTSRQWLRYRLPKRLIRREQRPMCVGQKQKWFLLRLKCREEDVDVLHSGHPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFATQAMPFRASGGRQHRRKR
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgcagaagggttccgggcaaacgtaggaatcgtcatctgtaacgggcatggg
caggtattttgggctcgtcgaattaaccagcaaagctggcagtttccgcaaggaggaatt
cacgaaggcgagacccctgaacaggcaatgtaccgcgaactctacgaagaggtcgggtta
aagccagagcaggttgaaattctgtacaccagccgtcaatggttgcgttatcgcttgcca
aagcgcttaattcgacgtgaacaacggcccatgtgtgttggacaaaagcaaaagtggttt
ttgttacggctaaaatgccgtgaagaagacgtagatgttttacattcaggccaccctgaa
tttgatggctggcgctgggtcagttattggtacccggtacggcaggtcgtatccttcaag
cgcgatgtttaccgtcgggtgatgaaagagtttgccactcaggcgatgccatttcgagct
tcgggagggcgtcagcacaggcgcaaacgttaa
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