Idiomarina sp. PL1-037: U0358_04455
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Entry
U0358_04455 CDS
T10248
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0358_04455 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idp03400
]
U0358_04455 (ruvB)
Enzymes [BR:
idp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0358_04455 (ruvB)
DNA repair and recombination proteins [BR:
idp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0358_04455 (ruvB)
RecFOR pathway proteins
U0358_04455 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
AAA_14
Mg_chelatase
nSTAND3
TIP49
NTPase_1
Rad17
AAA_2
RNA_helicase
AAA_18
AAA_17
Bac_DnaA
ABC_tran
NB-ARC
TniB
AAA_24
AAA_28
NPHP3_N
PaRep2b
bpMoxR
AAA_PrkA
TsaE
Motif
Other DBs
NCBI-ProteinID:
WQC53812
LinkDB
All DBs
Position
975020..976039
Genome browser
AA seq
339 aa
AA seq
DB search
MIEADQIPTQRLIEPDVQGEDEAVDRAIRPKNLADYTGQKHVVEQMGIFIEAARKRGEAL
DHLLIFGPPGLGKTTLANIVANELDVSIKTTSGPVLEKAGDLAALLTNLEAHDVLFIDEI
HRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRDRF
GIVQRLEFYDVNELTDIVARSAHFMNVRMLDGGAREIARRSRGTPRIANRLLRRVRDYAE
VRGNGDVDEATANAALTMVDVDQAGFDYMDRKLLLAIMEKFMGGPVGLDNLAAAIGEEKD
TIEDVLEPYLIQQGFLQRTPRGRVATPRAYQHFGLKPEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcaaatacccactcagcggctcattgaacccgacgtacaaggggaa
gatgaagccgttgatcgtgccatacggcctaaaaacctggcggattataccgggcagaaa
cacgtcgttgagcagatgggaatttttattgaggccgcgcggaagcgtggagaagcactg
gatcaccttttaatttttggtcctccggggctgggtaaaacgacgctagcgaacattgtg
gcgaatgagctggatgtgagtattaaaacaacttcgggcccggttctggaaaaagccgga
gatttagcggcgttgctgaccaacctcgaagcgcacgatgttttgtttattgatgaaatt
catcgtttaagcccggttgttgaggaaattctgtatccagctatggaagactatcagctc
gacattatgataggcgaaggtccggcagcgcgttcgattaaattagacttaccacccttt
acccttattggagccaccacccgtgcgggagcactgacgtcaccgctacgcgaccgcttt
ggtattgtgcagcgtcttgagttttatgatgttaatgaactaaccgacattgttgcgcgg
tcggctcattttatgaatgtccgaatgcttgatggtggagctcgtgaaatagctcgccgc
tcaaggggcactccacgtatagcgaaccgcttattgcgtcgggtacgcgactatgcagaa
gtcagaggtaatggtgacgttgacgaagcaacagccaatgcggctttgactatggtggac
gttgatcaggccggttttgattatatggaccggaagttgttattggccattatggaaaag
ttcatgggtggacctgtggggttagataacctggcagcagcgataggcgaagaaaaggat
actattgaggacgttctggaaccttatttaattcaacaagggttcttacaacgcacgccg
cgtggacgcgtagcgactcccagagcttatcagcattttggattaaagcctgaaaaatag
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