Idiomarina sp. PL1-037: U0358_07410
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Entry
U0358_07410 CDS
T10248
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
idp Idiomarina sp. PL1-037
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idp03400
]
U0358_07410 (phrB)
Enzymes [BR:
idp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
U0358_07410 (phrB)
DNA repair and recombination proteins [BR:
idp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
U0358_07410 (phrB)
Prokaryotic type
U0358_07410 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WQC51887
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All DBs
Position
complement(1583604..1585010)
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AA seq
468 aa
AA seq
DB search
MREVIWFRSDLRILDNPAVFSACQGDEPPLAIFFVCHETWESHDWAPIKVDFVWRNLECL
QQDLAEKGIELEVQLVPKFSQIPGAVRAFCRENEIARVHINAEYALDEKRRDAATNAVLS
NDDIELVSHHGNLLVSPGEVRTQQGDYYKKFTPFNRRWRQVLSEKAYSEPLQIKSYSRVT
AKGLPDCPLARKDSSDWSAGEQQVLGKLGQFVGHSIDDYQQGRDLPAENGTSQLSAYLAQ
GVIGPQTAARALHKFSPEFPFGLASGADTWLTELAWREFYQHLMYFVPRLSKGESFQTET
DSIQWLEDDDAFQRWCNGRTGYPIVDAGMRQLTSTGWMHNRLRMITANFLVKDLLVDWRK
GEAFFMQHLIDGSFPANNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPDGQYIRKWVDE
LKEVPTKYIHWPHSWLQQQSSNNYCEPIVEHKFARERFLTTFKQVKNG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagtaatttggtttcgtagtgatttaagaatattagacaacccggctgtcttt
tctgcatgtcagggcgatgagccaccgttggcgatattttttgtgtgtcatgaaacatgg
gaaagccatgactgggcgccgataaaagtagactttgtttggcgaaatttagaatgcctg
cagcaggatttagccgaaaagggcattgagctggaggtgcaactcgtccccaaattcagt
cagattcccggcgctgtaagagctttttgccgggaaaatgaaattgcccgggtacatatt
aatgcagagtatgcgctggatgaaaaacgcagagatgcagcgaccaatgcagtattaagc
aatgacgatatcgaactggtttcgcaccatggaaatctgttggtgtcgccgggagaggtc
agaacgcaacaaggtgactattacaaaaaattcacgccttttaaccggcgttggcgacaa
gtattaagcgaaaaagcttatagcgaaccgctgcaaatcaaatcttattctcgagttacc
gcaaaaggcctccctgactgtccgctggctagaaaagactcgtctgactggagtgctggc
gagcagcaagttctggggaaactggggcaattcgtcggccacagtattgatgattatcaa
caaggcagagatctgccggctgaaaacggaacctcacaactttccgcttatttggcgcag
ggagttattgggccgcagacggctgcccgggcgctacataagttttcgccagagtttccg
tttggacttgcttccggtgctgatacctggcttaccgaactggcatggagagagttctat
cagcatctaatgtactttgtgccgcgcttatcaaaaggggaaagctttcagactgaaacg
gacagcattcagtggttagaggacgatgacgcttttcaacgttggtgtaatggccgcacg
gggtacccaattgttgacgccggaatgcgtcaattgacatcaacggggtggatgcacaac
cgcttaagaatgatcacagccaattttctggtaaaagatctattagtagattggcgaaaa
ggtgaagcctttttcatgcagcatttaattgatggcagtttcccggcaaacaacggtggc
tggcaatggagtgcttcggttggaactgacgccgttccctattttcgtgtttttaatccg
gttaagcaaagtgagaaatttgatcctgacgggcagtacattcgtaagtgggtagacgaa
cttaaggaagtaccaacaaagtatattcactggcctcatagttggcttcagcaacaaagc
agtaataactattgcgaacccatagtcgagcacaaatttgctcgtgaacgattcttaaca
acgtttaagcaggtgaaaaatggataa
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