Idiomarina sp. PL1-037: U0358_07555
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Entry
U0358_07555 CDS
T10248
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
idp Idiomarina sp. PL1-037
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idp03009
]
U0358_07555 (dbpA)
Enzymes [BR:
idp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
U0358_07555 (dbpA)
Ribosome biogenesis [BR:
idp03009
]
Prokaryotic type
rRNA helicases
U0358_07555 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Terminase_6N
Helicase_C_2
AAA_22
AAA_19
UvrD-helicase
SNF2-rel_dom
NAT10_TcmA_helicase
P-loop_SecA
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
WQC51913
LinkDB
All DBs
Position
1614520..1615932
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AA seq
470 aa
AA seq
DB search
MPIISDKNTPENSPELIHFNQLNLPSALLTRLDEIGYQQMTQVQSLSLPVILNNTDAVVR
ADTGSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTL
CGGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDS
LSAIVKHIPKARQTLLFSATYPKNIAALAEQVTTKARNIEAIQEQAKPQIEQLFYAMNNE
DSAQLVMNLLGEHQPENCLVFCNTKNEVKDIFNTLRANKFSVLALHGELEQKDRDQAIIQ
FSNGSARVLIATDVASRGLDIAELDLVISVNMAHDLDTHTHRIGRTGRAGKEGVAITLIA
EKDDYKMRLLEDTFAEPIQVQPAPALSDNTPLKATMSTIQVSGGKKDKLRPGDIVGALTK
DKVLSADDIGKIKLESTFGFVAVNSRLAKHALGLINNNKIKGKKFRAKIL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccataattagcgataaaaacacccctgagaattcacctgaactcattcattttaac
caattgaacctgccgtcggcgttactgacacggcttgatgaaattggttaccaacaaatg
acacaggtgcagtccttaagcttgccggttattttaaacaacaccgatgccgttgttcgc
gcggataccggctccggaaaaaccaccgcttttgcgctgactttgctggcaaagctggag
gcaaaaagcttttcgccacaggcgttggtattgtgtcctactcgtgaactcgcccatcag
gttgctgacgaggttcgtaagctggctaaatcaatgcttaatatcaaaatactgaccttg
tgtggtggcgagccatcacgtattcagactaactcgcttgaacatggggctcatgtgttg
gttggcacacccggccgggtgcttgatcatcttgagcagcgcaatgtcgatttgtccatg
ttgacaactctggttcttgatgaggccgaccgaatgttagaaatggggtttcaggacagc
ctgagtgctatcgttaagcacattccaaaggcgcgacagacactattattcagtgccacc
taccctaaaaatatcgccgccttagcagaacaagtgacaactaaggcaaggaatattgag
gccattcaagagcaagcaaagccacaaattgaacagctcttttatgccatgaataatgaa
gacagcgcacagctggtaatgaatttattgggcgagcatcaacccgaaaactgtctggtt
ttctgcaataccaaaaacgaagtaaaagatatttttaacacacttcgggccaataagttc
agcgtgttggctctgcatggtgagctcgaacagaaagatcgcgatcaggccattatacaa
tttagtaatggcagtgcccgggtgcttattgcgactgacgtagcctcccgcggcttagat
atcgccgaacttgatttagtgattagcgttaatatggctcatgatttagacacccatact
caccgcataggtcgtactggccgcgccggcaaagaaggcgtcgcaataaccctaattgcc
gaaaaagatgattacaaaatgcgtttgcttgaggatacgtttgccgaacctattcaagta
cagcctgcgccagcgctatctgacaacacaccgttgaaagctactatgtccaccatacaa
gtcagtggcggaaaaaaggacaagttgagaccgggtgacattgttggcgcgctaacaaag
gacaaggttttaagtgctgacgacattggaaagataaagctggaaagcacctttggtttt
gttgccgtaaattcccgtttggctaagcacgctctagggcttattaataataataaaata
aaaggtaagaagtttcgggcaaaaatactttaa
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