Idiomarina sp. PL1-037: U0358_10205
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Entry
U0358_10205 CDS
T10248
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03018
RNA degradation
Brite
Enzymes [BR:
idp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U0358_10205
Messenger RNA biogenesis [BR:
idp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U0358_10205
Ribosome biogenesis [BR:
idp03009
]
Prokaryotic type
rRNA helicases
U0358_10205
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Gene cluster
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Other DBs
NCBI-ProteinID:
WQC52406
LinkDB
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Position
complement(2161316..2163091)
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AA seq
591 aa
AA seq
DB search
MSNTQTGVSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTA
AFGLPALAKIDASVKQTQILVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQ
VKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFVEDIETILKAVP
STAQRALFSATMPNAIRKLAKTFLKDPLNIQIEAIAREKATIKQKAWKVQGMTKMTALTR
LLEVTPYQRALIFVRTRQDTMDVAELLQRNGFKAAPLSGDLNQAQREQTVSQLRSGHIEI
LVGTDVVARGLDVPEITHVINYDLPSDTESYVHRIGRTGRAGRTGEAILFFRAKERHLLR
HYERLTNAPVEFFEVPNANELSKYRQQQLLEKLQASLAPETASADKPKLEKLLGDWLEQS
ELSAEEIALALLAQHNEQRPLFLKEDRPVREARSERSGRNERSDRGDKRKPRAERGGRAA
DVDFETYKIQVGREHGARPGDIVGAIANEASMDSKYIGQIQLFDNHSLVQLPKGMPKDIM
HVLKKARVRQQPMGLELSDEQVRRAPRPARERDTRSGPKRSSGKGAARRFN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatactcaaacaggcgtgtcgtttaacgacatggccttacctagtgctgtgctt
gaacaattaaacgcaatgcagtttttaactccgacccctattcagctgcaggctattcct
gcgttgcttgaagggcaagacgtgctgggcgaagctcagacaggtaccgggaaaaccgct
gcgtttggtctgcctgcactggcgaaaattgatgcgtcggttaagcaaactcaaatatta
gtcgtaactccaactcgtgagctggctattcaggtagcagaagcgcttgaaggttttgct
gcgaaaatgcgtggcgtcggcgttgcgaccgtttacggtggtgcaccctttggtcctcag
gttaaagccctgaagcagggaactgctatagttgttggtaccccgggtcgtcttatcgat
ttattgaataaaaacgtcctgcaactggacggtttgaaagtgggcgttctggacgaggcc
gatgaaatgctcaacatgggcttcgttgaagacatcgaaaccattttaaaagctgtgccg
agcaccgcacaacgcgcattattttcagcaactatgccaaatgcgattcgtaagctggca
aaaaccttcctgaaagatccgctgaacattcagattgaagctattgcccgcgaaaaagcg
actattaagcagaaagcctggaaagttcagggcatgacgaaaatgaccgccctgactcgg
ttgttagaagttactccttatcagcgcgcattgattttcgtacgtacccgtcaggatacg
atggatgtggctgaattactgcaacgtaatggctttaaagcggcgccattaagcggtgat
ttgaaccaggctcagcgtgagcagacggtcagtcaattacgtagtggacatatcgagatt
ctggtaggaaccgacgttgttgctcgtggtttagatgttcctgaaattactcacgtgatt
aactatgacttaccaagcgatactgaatcttatgttcaccgtattggacgtactggtcgt
gccgggcgtacaggtgaggcgattttattcttccgtgcaaaagaacgtcatttgttgcgt
cactatgagcgtttaaccaatgcaccggtcgagttctttgaagtaccaaacgccaatgaa
cttagcaagtatcgtcagcaacagttactggaaaagctgcaggcgtcactggctcctgaa
actgcaagcgccgataagcctaagctagagaaactgttaggcgactggctggaacagtct
gagttgagtgctgaagaaattgccttagcgttattggctcagcataatgagcaacgtcca
ttgttcctgaaagaagaccgtccggtacgtgaagcacgtagcgaacgttcaggtcgcaat
gaacgcagtgaccgtggcgataagcgtaaacctcgtgcagagcgtggcggtcgtgcagcg
gatgtcgattttgaaacctacaaaattcaggtaggccgtgagcatggcgctcgtccggga
gacatcgttggggctattgctaacgaagcgtcaatggacagcaagtatattggacaaatt
cagttgttcgataatcactctttagtccaactgccaaaaggcatgccaaaagacattatg
cacgtactgaagaaagctcgtgtgcgtcaacagcctatgggcttggaattaagcgatgag
caagtacgtcgcgcaccacgcccggctcgtgaacgtgatacgcgtagcggccctaagcgc
agttccggtaaaggtgccgcgcgccgttttaattaa
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