Idiomarina sp. PL1-037: U0358_11735
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Entry
U0358_11735 CDS
T10248
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0358_11735 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
idp03019
]
U0358_11735 (groL)
03110 Chaperones and folding catalysts [BR:
idp03110
]
U0358_11735 (groL)
03029 Mitochondrial biogenesis [BR:
idp03029
]
U0358_11735 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
idp04147
]
U0358_11735 (groL)
Enzymes [BR:
idp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
U0358_11735 (groL)
Messenger RNA biogenesis [BR:
idp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U0358_11735 (groL)
Chaperones and folding catalysts [BR:
idp03110
]
Heat shock proteins
HSP60 / Chaperonin
U0358_11735 (groL)
Mitochondrial biogenesis [BR:
idp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
U0358_11735 (groL)
Exosome [BR:
idp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
U0358_11735 (groL)
Exosomal proteins of other body fluids (saliva and urine)
U0358_11735 (groL)
Exosomal proteins of breast cancer cells
U0358_11735 (groL)
Exosomal proteins of colorectal cancer cells
U0358_11735 (groL)
Exosomal proteins of bladder cancer cells
U0358_11735 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PA
Motif
Other DBs
NCBI-ProteinID:
WQC52692
LinkDB
All DBs
Position
complement(2495593..2497239)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGNTARQQMLKGVNILADSVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAVIAAVEELKKISQPCADSKAIAQVATISANADHTIGEIIAQAMDKVGQEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLIDKKISNIRELLPVLEGV
SKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
VSEEIGMELEKTQLEDLGTAKRVVITKDNTTVVDGNGDDTAIDGRVNQIKQQMEDTTSDY
DREKLQERLAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RAASQLAELRGDNEEQNVGIRLALRAMEAPLRQIAMNAGAEGSVVANNVRGGEGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASVGALMITTEAMIADIPQDDNAGGMPGGDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcaagtttggtaacacagcgcgtcaacaaatgctgaaaggcgtt
aatattcttgctgattcagtaaaagtgactctgggtccaaaaggtcgcaacgttgtatta
gacaaatcattcggttcgccagttattactaaagacggtgtttctgttgcgaaagaaatc
gagctggaagacaagttcgagaacatgggcgcgcagatggttaaagaagtcgcgtctaaa
gcaaatgacgaagcaggtgacggtacaacaactgcaaccgttctggctcaagctattgtt
aacgaaggcttgaagtcagtcgccgcaggcatgaacccaatggatcttaaacgcggtatc
gacaaagcggttatcgctgcagttgaagagctgaagaaaatttctcagccttgtgccgac
agcaaagcaatcgctcaggtagcgactatttctgcaaacgctgatcacactattggtgaa
atcattgctcaggctatggacaaagtaggtcaggaaggtgttatcaccgttgaagaaggt
caggcactgactgacgagctggacgttgttgaaggtatgcagttcgaccgtggttacttg
tctccttacttcattaacaatcaggaaagcggttcggttgaattagacaacccgttcatt
cttctgattgataagaaaatctctaatatccgcgagttactgccggtattagaaggtgtg
tctaaagccggtaaacctctgctgatcattgctgaagacgttgaaggcgaagcgctggca
actctggttgtgaacaacatgcgtggcatcgttaaagttgcagcggttaaagcaccaggc
tttggtgaccgtcgtaaagcgatgctgcaggacattgctgttctgactggcggtactgtg
gtctctgaagaaattggtatggagctggaaaaaactcagctggaagacttaggtacagcg
aagcgcgttgtgattactaaagacaatactactgttgttgacggtaatggcgacgatacc
gctatcgacggtcgcgttaaccaaatcaagcagcagatggaagacacgacgtctgactac
gaccgtgaaaaactgcaagagcgtctggctaagttagctggcggtgttgcggtaattaaa
gtcggcgctgctactgaaatggaaatgaaagagaaaaaagcacgcgtggaagatgcgttg
catgcaactcgtgcagctgttgaagaaggcgtggtgcctggtggtggtgttgctctggtt
cgcgcggcaagccaactggcagaactgcgtggtgataacgaagagcagaacgttggtatt
cgtttagccctgcgtgcgatggaagcaccgttgcgtcaaatcgcaatgaacgctggcgct
gaagggtcagtggttgctaacaatgttcgtggtggcgaaggtaactatggttacaacgct
ggtaacgacacctacggcgatatgctggaaatgggtattctggatccaaccaaagtcacc
cgttcggcgcttcagttcgccgcatctgttggcgcactgatgatcacgaccgaagcaatg
attgctgatattccacaagatgacaacgcaggcggtatgcctggcggcgacatgggtgga
atgggcggcatgggcggcatgatgtaa
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