Idiomarina sp. PL1-037: U0358_11970
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Entry
U0358_11970 CDS
T10248
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0358_11970 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
idp01007
]
U0358_11970 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idp03016
]
U0358_11970 (trpS)
Enzymes [BR:
idp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
U0358_11970 (trpS)
Amino acid related enzymes [BR:
idp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
U0358_11970 (trpS)
Transfer RNA biogenesis [BR:
idp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
U0358_11970 (trpS)
Prokaryotic type
U0358_11970 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Sec20
Motif
Other DBs
NCBI-ProteinID:
WQC52735
LinkDB
All DBs
Position
complement(2544732..2545739)
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AA seq
335 aa
AA seq
DB search
MSKPIVLSGCQPSGQLSIGNYIGALRQWVNMQDTHECKFMLVDQHAITVRQEPEKLQQAT
LDGLALYLACGLDPAKSTVFIQSHVPEHTQLAWVLNCYTQMGELNRMTQFKDKSQRHASN
INAGLFTYPALMAADILLYQANEVPVGDDQKQHLEMTRNVAERFNNLYGDIFTIPEPMIP
KVGARVMSLQEPTKKMSKSDDNPNNFVGLLEEPKKILKKIKKAVTDSDEQARIYFNQEEK
PGVSNLLSIMSAATGKSIDELVPDYEDKMYGHLKVDVAESVVAMLEPIQQRYHDMRNDQA
FLQQVMKQGADKAREASAKTLSDVYKAVGFVPYPG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccaattgtgttaagtggttgtcagccgtcggggcaattgtctattggtaat
tacattggcgcactacgtcagtgggttaatatgcaagacactcacgagtgtaaatttatg
ctggttgatcagcacgccattactgtacgtcaggagccggaaaaattgcagcaggcaacc
ctggacgggctggctttgtacctggcttgtggccttgacccagcgaaaagcactgtgttt
attcagtcgcatgtacccgaacatactcaacttgcctgggttttgaactgctacactcaa
atgggtgagctaaaccgcatgacgcagtttaaggataagtctcagcgtcacgctagtaat
attaacgcgggtttgtttacttacccggcgctaatggcggcagacattctgttgtaccag
gcgaatgaagtgccggtgggcgatgaccagaagcagcacctggaaatgacccgtaatgtt
gctgagcgttttaataacttgtatggcgatatttttacgattccggagccaatgattcca
aaagtcggtgcgcgggtcatgtcattgcaggagccgactaagaaaatgtcaaagtcggac
gataacccgaataactttgtaggtttattggaagaaccgaagaagattctgaagaaaatt
aagaaagccgttaccgactccgacgagcaggcgcgcatttactttaatcaggaagaaaag
ccgggtgtatcgaatttactgagcattatgtctgctgccacgggtaagtcgatagacgag
ctggtaccggactatgaagacaaaatgtacgggcatttaaaagtagatgtggcagagtct
gtggtggccatgctggaacctattcaacagcggtaccacgacatgcgtaatgaccaggca
tttttgcaacaggttatgaaacaaggcgctgataaggcacgtgaagcctcagcaaaaacg
ttgtcagatgtttacaaagcggtaggttttgtaccctacccaggataa
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