Idiomarina sp. PL1-037: U0358_13135
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Entry
U0358_13135 CDS
T10248
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
idp Idiomarina sp. PL1-037
Pathway
idp00300
Lysine biosynthesis
idp00470
D-Amino acid metabolism
idp01100
Metabolic pathways
idp01110
Biosynthesis of secondary metabolites
idp01120
Microbial metabolism in diverse environments
idp01230
Biosynthesis of amino acids
Module
idp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
idp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0358_13135 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0358_13135 (lysA)
Enzymes [BR:
idp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U0358_13135 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-ProteinID:
WQC52965
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Position
complement(2798214..2799476)
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AA seq
420 aa
AA seq
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MSELIDYKNGQFHIENCDVESLVERFSSPLYVYSKGQILKNWREFQQYWPAPHKLCYAVK
ANSNLAILQLLAEHGAGFDIVSGGELQRVLMAGGKADDVVFSGVAKSKDEIIMALEAGIG
CFNVESEAELERIQDIAAAMDKQAPVSLRVNPDVDAKTHPYIATGMKANKFGISMSLAKP
VFLKAHSLPNINLIGADCHIGSQIMTAEPFLDAAQRMFNLVSELEKDGIQLTHLDLGGGF
GVAYQPEEPLDKSFYLKELVKLAENYPQITMVLEPGRAITADAGVLLTTVEYIKPSDDKN
FVLVDAGMNDLLRPSLYQAWHDILPAHENKRGGDQLNDIVGPVCETGDFFGHARHLNVQQ
GDILAIKHTGAYGFTMASNYNSRGRPPEVLVSGDNATLIRERESFNDLVRGEHLLHQEGK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaattgactataaaaatggccagtttcatattgaaaactgcgacgtcgag
agtcttgttgagcgttttagttcgcctttgtatgtttactccaaaggtcagattctaaaa
aactggcgcgagtttcagcaatactggcccgcacctcataagctgtgttatgcggtaaaa
gccaatagcaacttagctattctgcagttactggccgagcatggcgcgggtttcgatatt
gtctccggtggcgagcttcagcgtgtattaatggccggcggtaaagctgacgacgtggtt
ttttccggtgtggctaaatccaaagacgaaatcattatggcgctggaagcgggcatcggc
tgctttaatgtagagtctgaggcggagcttgagcgtattcaggacattgctgctgccatg
gacaaacaggccccggtgtcgttaagagtgaaccccgacgttgatgccaaaacgcatccg
tacattgctacgggcatgaaagccaacaagtttggcatcagcatgtcattggctaagccg
gtgtttcttaaggcgcatagcttacccaacattaatctgattggtgcggattgccacata
ggttcgcaaataatgacagcggaaccttttctcgatgccgctcagcgcatgtttaatctg
gtttcggaactggaaaaagacggtatccagctgacacacctggatttaggtggcggtttt
ggtgtggcgtatcagccggaagagccgttggataagtccttttatttaaaagaactggtt
aagttagccgaaaattacccgcaaattactatggtactggagcccggacgcgcaattacg
gcggatgccggagttctgctaaccacagtggaatacattaaaccctcagacgataagaat
tttgttttggtcgatgccggcatgaacgacttattacgtccgtctttgtaccaggcctgg
cacgatattttaccggcgcacgaaaataagcgcggcggcgaccagttgaatgatattgtc
ggcccggtgtgtgaaaccggtgactttttcggacacgcacggcacttaaatgtgcaacag
ggcgacatactggctattaaacataccggtgcctatggttttactatggcgtctaactat
aacagtcgtggccgcccgcccgaggttttggtctctggtgataatgctacactgatccgc
gaacgtgaaagttttaacgatctcgtccggggcgagcacttgttacaccaggaaggcaaa
taa
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