Idiomarina sp. OT37-5b: C5610_00125
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Entry
C5610_00125 CDS
T05379
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03030
DNA replication
idt03410
Base excision repair
idt03420
Nucleotide excision repair
idt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5610_00125
03410 Base excision repair
C5610_00125
03420 Nucleotide excision repair
C5610_00125
03440 Homologous recombination
C5610_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idt03032
]
C5610_00125
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_00125
Enzymes [BR:
idt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5610_00125
DNA replication proteins [BR:
idt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C5610_00125
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C5610_00125
NER (nucleotide excision repair)
GGR (global genome repair) factors
C5610_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AVJ54839
LinkDB
All DBs
Position
27384..30155
Genome browser
AA seq
923 aa
AA seq
DB search
MTKNVPENPFILVDGSSYLFRAFHAPPHLTNSKGEPTGAIYGVVNMLRSLLKRYKPENMA
VVFDAKGKTFRSDIYAEYKAHRPPMPDELRSQIEPLHEIVKAMGLPLLCVDGVEADDVIG
TLATQAGEEGRFTLISTSDKDMAQLVNEHVMLINTMTDTLLDEEGVKEKFGVAPDQIIDY
LALMGDSSDNIPGLPKVGEKTAQALLQGIPSIDAIYDDVDAVTKLSFRGAKSMPKKLQEY
RDQLLMSRELATIKCDVELDFNPQQLSISAADNDKLAELYGRCEFRRWLSELLEQGAATD
QALGLTHNSDDAPDTGVSRDGYQTLLSEDEVSEYLQKLNTLDYFAFDTETTSLNYMDAEL
VGVSLSGAEGEGVYIPVAHDYMEAPEQVSRDWLLQQLKPLLEADKPQKVGQNLKYDAHIL
RRYDIRLAGIKNDTMLASYVFNSVGSRHDMDTLSLQYLNHKPIKFEDIAGKGAKQLTFNQ
IALEQAAPYAAEDADITLRLHEVLWSKLESTSDELMHVLTDIEIPLISVLTDMEEYGVRI
DADMLAQQSHDIEKLLVEYERKAFEIAGEEFNLGSTKQLQAILFDKLQLPVIKKTPKGAP
STAEDVLHELAHDYPLPDVILRHRSLSKLKSTYTDKLPKMINARTGRVHTSYQQAVAATG
RLSSTEPNLQNIPIRTEEGRRVRQAFVPEPGYKIVAIDYSQIELRIMAHLSQDKALLTAF
AEGKDIHRATAAEVFSCSLDEVSDEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQHY
MDKYFERFPGVLRYMEDTRKLAKEQGFVKTLYGRRLPLPDIKASNGAGRKAAERAAINAP
MQGTAADIIKRAMIAVDQWIAEKQCQKDVRMLMQVHDELVFEIAEHKIDDYVSALSHVME
QAASLDVPLIAEAGVGMNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaatgtaccagaaaacccatttattctcgtcgatggctcttcgtatttattt
cgagcgttccacgcgccacctcacctgacgaactccaaaggcgagcccaccggcgcgatt
tatggcgtcgttaatatgttacgcagtttgcttaagcgctataagccagagaacatggcg
gtcgtttttgatgctaaaggcaaaacctttcgcagcgatatttacgctgaatataaagca
caccgtccgccgatgccggatgagctgcgctcccagattgagccgttgcatgaaattgtc
aaagcgatgggtttgccgttgctgtgtgtggacggtgtagaagcggacgatgtcattggg
accttggcaactcaggcgggcgaagaagggcgctttaccttaatcagcaccagcgataaa
gacatggcgcagttggttaatgagcacgtgatgctgatcaacaccatgaccgataccttg
ttggacgaggagggtgtgaaggaaaagttcggtgtcgcgcccgaccaaatcatcgactac
ctagcgttgatgggtgacagttccgataacattccgggtttaccgaaagtgggtgagaaa
accgcgcaggcgctgttacagggaattccgtcgatagatgccatttatgacgatgtcgat
gcggtaacaaaactgagtttccgtggtgccaagtcaatgccgaaaaaattgcaggagtac
cgtgatcaactgctgatgtcccgagagctggccaccatcaaatgcgatgtggaactggat
ttcaaccctcagcaactcagcatttctgcggctgataatgataaattggccgagctgtac
ggacgttgtgaattccgtcgttggttaagcgagttattggaacagggcgctgccaccgac
caggcgttaggtttaacgcataatagcgacgatgcgccagacacgggtgtttcccgcgac
ggctatcaaaccttactgagtgaagatgaggtcagtgagtacttacaaaagcttaacacc
ctcgattattttgcctttgatacagagaccaccagcctcaactacatggatgcggagttg
gtcggcgtgtcgttatcgggtgctgaaggtgaaggcgtgtatattccggttgcacatgac
tacatggaggcgccggagcaagtcagtcgtgactggttactgcaacaattaaaaccgtta
cttgaggctgacaaaccacagaaagtcggacaaaacctaaagtacgatgctcatattcta
cgtcgttacgatatccgcttagcgggcatcaaaaacgacaccatgctcgcgtcatacgtg
tttaatagtgttggttcgcggcatgacatggacacactgagtttacagtacttaaatcac
aaaccgattaaatttgaagacatcgcgggtaaaggtgctaagcaactgacgtttaatcaa
attgcattagaacaggcagctccctatgcggcagaggatgcggatatcaccttgcggttg
catgaagtgctgtggagcaagctggaatcaaccagtgatgagttgatgcacgtgttgacg
gacatcgaaataccattgatttcggtactaaccgacatggaagagtatggcgtacgtatt
gatgccgatatgctggcgcaacaaagccatgatatcgaaaaactgctggtggagtatgag
cgcaaggcgttcgaaattgctggcgaagagtttaacttaggctcaaccaaacaactgcag
gccattctgtttgataaattgcagctcccggtcatcaaaaagaccccgaagggcgcaccg
tcgacggccgaagatgtattgcacgaactggcgcacgactacccgttgccggacgtgatt
ttgcgccaccgtagcttatcgaaattgaaatcaacttataccgataagctgccgaaaatg
attaatgcccgcaccggccgagtgcatacatcgtatcaacaggcggttgcggcaaccgga
cgattgtcgtcaacagaaccgaatttacagaatattccgatccgtaccgaggaaggtcgt
cgggttcgtcaggcgtttgtgcctgaacccggctacaaaattgtggccattgactacagc
caaatcgaactgcggatcatggcgcatttatctcaggataaggcgcttttgacggcgttt
gcagaaggtaaagatattcaccgggcgacagcggcagaagtgttttcttgcagcctcgat
gaagtatctgacgagcagcggcgtcgagcgaaagcggttaactttggcttgatctatggt
atgtcggcttttggcttagctcgccagttggacattccgcgccatgaagctcagcactat
atggacaagtactttgaacgattcccgggtgtgcttcggtatatggaagatacgcgtaag
ttggcgaaagaacagggatttgtaaaaaccttgtacggtcgacgcctaccacttcctgac
attaaggcgtccaatggggccggtcgtaaagccgctgaacgagcggcaatcaatgcacca
atgcagggtacagccgctgacattattaaacgagcaatgattgcagttgatcagtggatc
gccgaaaagcaatgtcagaaagacgtacgtatgctcatgcaggtgcacgatgaactggtg
tttgaaattgctgaacataaaattgatgactatgtcagtgcattaagtcatgtcatggaa
caggccgccagccttgatgtgccgcttattgccgaagcgggtgtcggcatgaattgggac
gaagcacactaa
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