Idiomarina sp. OT37-5b: C5610_00815
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Entry
C5610_00815 CDS
T05379
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
idt03021
]
C5610_00815 (rpoH)
Transcription machinery [BR:
idt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C5610_00815 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Tower
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AVJ54963
LinkDB
All DBs
Position
173297..174157
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AA seq
286 aa
AA seq
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MSTELQTMALSVPQGGGLDGYIQAVNRIPMLTAEKEKELATRLYHEGDLDSARELIMSHL
RFVVHIARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVL
RNWRVVKVATTKAQRKLFFNLRKMKKRLGWFSQKEVETVAEELGVSTKEVMEMEARMSAH
DQAFELSSDDDDAKEGSNYTPAMYLEDKRSDLAEEIEAEDYEAHTQKKLFTAMSQLDERS
QDIVQSRWLTDNKATLHDLAAKYQVSAERVRQLEQNAMKKLRTAMA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaattacaaaccatggcgttgtcagtcccacaggggggcggtcttgacggt
tacattcaggctgtaaaccgcattccgatgttgactgcggaaaaagagaaagagttggca
actcggttgtatcacgagggcgatctggattcagcgcgagaactgatcatgtcgcacctg
cgttttgtggtgcatattgcccgcggctattctggctatggtttaccgcaagctgatttg
attcaagaaggtaatatcggcttaatgaaagcggtaaaacgttttaaccctgaagttggg
gttcgcttagtatcttttgctgtgcattggataaaagcagaaattcatgaatacgtgctg
cgcaactggcgcgttgttaaagtggcaaccaccaaggcgcaacgtaaattattctttaat
cttcgtaaaatgaagaaacgtctgggttggttcagccagaaagaagtggaaacagtggcg
gaagaactgggcgtatcaaccaaagaagtcatggaaatggaagctcgaatgagcgctcat
gaccaggcatttgagttgagctctgacgacgatgatgcgaaagaaggcagtaattatacg
ccggccatgtatcttgaagacaaacgttctgatctggcagaagaaattgaagcggaagat
tacgaagctcatactcagaaaaagctgtttacggcgatgagtcagttggacgaacgcagt
caggacatcgtgcagtcacgttggttaacggacaataaagccaccttgcacgatttagcc
gccaaatatcaggtatcggcggaacgtgtccgtcagcttgaacaaaatgcgatgaagaag
ctacgcacagcaatggcgtaa
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