Idiomarina sp. OT37-5b: C5610_01725
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Entry
C5610_01725 CDS
T05379
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt00470
D-Amino acid metabolism
idt00550
Peptidoglycan biosynthesis
idt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C5610_01725 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C5610_01725 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idt01011
]
C5610_01725 (murD)
Enzymes [BR:
idt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C5610_01725 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
idt01011
]
Precursor biosynthesis
Amino acid ligase
C5610_01725 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AVJ55127
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Position
353759..355123
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AA seq
454 aa
AA seq
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MSSIDWQNVEQITVLGLGKSGLSVLRYLQRQFNNDISNGTLSIRAFDSREQAPGREQASA
LIGAENVFCRRWQLEDTLAADVLVLSPGIDAREEPIELAMQAGVIVTGDVELFAQQVRQP
VVAITGSNGKSTVTRMVEHIARRAGINALAAGNIGLPVLDALAQNADAYVLELSSFQLET
LNSLRPKAATVLNISPDHMDRYPSLADYTAAKLRIYQGSEIQVLNRQQPECWPTQCSSTL
RFGDDDAAEFGLIRHQDETWISYQGKRLLGAHQLTVQGLHNLLNAQAALALSSALGISVN
EAARHLVQFYGLPHRCQLVTERNGVKWVNDSKATNIGATEAAIKGMRPIVAGKLILIAGG
EGKGADFSALQASLKQVDVLLTIGKDGPAIGALFNGSRQLQSLDDAVALASTLSEPGDMV
LLSPACASFDQFDNFEHRGDVFARAVEAHDEQSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaattgactggcaaaacgtagaacaaatcacggtactgggcttgggtaagtcc
ggcctttccgtgctgcgttacttgcaacgtcagtttaacaacgacatcagcaacggtacc
ttaagcattagggcgttcgattcacgagagcaggcgccggggcgagaacaggcaagtgcc
ttgatcggcgcagagaacgtgttttgtcggcgttggcagttggaagacacgctggcggcg
gatgtactggtgttaagccccggtatcgacgcgcgtgaagagcctatcgagctggcgatg
caagccggcgtgatcgtcaccggcgatgttgaactgtttgcccagcaggtgcgccagccg
gtggtggcgattaccggctctaatggcaagtcgacggttacccgaatggtagaacacatt
gctcgacgcgccggtatcaacgcactcgcggcaggtaatattggcttgccggtattggat
gcgctggcgcaaaacgctgacgcctatgtgctggagctgtccagttttcagttggaaacc
ctcaattcattgcggccaaaggccgcgaccgtgctcaatatcagcccggatcatatggat
cgttatccgagcctggccgactatacggcggcgaaactgcgcatttatcagggttcggag
atacaggtgctgaaccgtcagcaaccggagtgctggccaacccagtgcagctcaacctta
cgctttggtgatgacgatgcggcagagtttgggctcatcaggcaccaggacgaaacctgg
attagctatcagggtaaacgtctgcttggcgctcatcaattgacggtgcagggcttgcat
aacttgctcaacgcccaggcagcactggcattaagttcagcattgggtatctccgttaat
gaggcagcccgtcatctggtccagttttatggtctcccgcatcgttgccaattagtgaca
gagcgcaacggtgttaagtgggtgaatgattcgaaagccaccaatatcggagcaaccgag
gccgccattaagggtatgcgcccgattgtcgccggtaaattgattcttatcgccggcgga
gagggcaaaggcgccgactttagcgcgttacaggcaagtttgaagcaggtcgatgtgcta
ttaaccattggcaaagacgggccggccattggcgcattattcaatggctcacggcagtta
caaagccttgacgatgcggtagcgttggcgtcaaccctgagtgaaccgggcgatatggta
ctgctgtcgcctgcctgcgccagttttgatcagtttgataattttgaacatcgcggtgac
gtgttcgcccgggctgtggaggcgcatgatgaacaaagcgcatga
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