Idiomarina sp. OT37-5b: C5610_02735
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Entry
C5610_02735 CDS
T05379
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03030
DNA replication
idt03430
Mismatch repair
idt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5610_02735
03430 Mismatch repair
C5610_02735
03440 Homologous recombination
C5610_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idt03032
]
C5610_02735
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_02735
Enzymes [BR:
idt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5610_02735
DNA replication proteins [BR:
idt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C5610_02735
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C5610_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Piezo_THU9_anchor
Motif
Other DBs
NCBI-ProteinID:
AVJ55313
LinkDB
All DBs
Position
607803..608450
Genome browser
AA seq
215 aa
AA seq
DB search
MGKLLGALADWYQRRQQLQKPWTQQRYVALDIETTGLDPKKHQVLSIAWMSIEPPVMHTG
SAQYHVFSHGQELELGQSPTIHGLTRQDFLHSSEPRQTYAMLSRALSGAVLVCHHKGMDW
RFLKHIEKQYFVNFRPLGIFDTLAFEKNSMFKDLSNPPQKGQLTLNACRLRHGLPNYTSH
HALTDTLSCAELFLAQAFKFSGNDATTRELIDFAR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacttctcggtgccttagccgattggtatcaacgccggcaacaactgcaaaag
ccctggacgcagcagcgctatgtcgcgcttgatattgaaaccactgggttggatcccaaa
aagcaccaagtactctccattgcctggatgtcgatagaaccgccggtgatgcataccggt
agtgctcaatatcatgtgttttctcatgggcaggaacttgagctaggtcaaagtcccacc
attcatggtttgacacgacaggattttttgcacagttcagaaccacgacaaacttatgcg
atgctaagccgagccttgtctggcgcggtattggtgtgccatcacaaaggcatggattgg
cgttttctgaagcacattgaaaaacagtattttgtaaatttcaggccgttgggcatattt
gacacgctggctttcgaaaaaaatagcatgttcaaagatctaagtaacccgccgcaaaag
ggacagctaacgttaaacgcatgccgtttgcgccatggactaccaaactatacatcccat
catgctctaacggatacgttatcgtgtgctgaactatttttggcacaagcttttaagttt
tccggaaatgacgctacaacccgagaattgattgattttgctcgttaa
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