Idiomarina sp. OT37-5b: C5610_02870
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Entry
C5610_02870 CDS
T05379
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
idt03000
]
C5610_02870
Transcription factors [BR:
idt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C5610_02870
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AVJ55338
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Position
complement(644562..645431)
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AA seq
289 aa
AA seq
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MNYKHLYYFWHVAASGHLTQTAQKLHVSQSALSSQIKQLEDWFGMALFERRGRQLVLTQA
GHIAKQHADRIFAEGESLVKQLKEGASDQPAIIRIGHASTMSRNFVEAFINDLVSQKEVH
YRLHSMTPDQLFNELANHQIDIALANTNVRGSDKQLWQSRLLARQPVSLIGPPGRAITEL
NSPALVKQHWVLPPENLSLRLAFDMLSAEYNWQPIVLAEADDMAMLRLLTRDTGALAVIP
DVVVRDELNSGQLSRYLQLPNVYEQFYAITLKRPFQHPMVVQLLQQFSL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaacacctttattacttttggcacgtggccgccagcggtcatctgacccag
accgcacaaaagctgcacgtgtcgcagtcggcgttatcgtcacaaattaaacagctggag
gactggtttggcatggcgttgtttgaacgccgtggccgccagttggtgttaactcaggcc
ggccatattgccaagcagcacgccgaccggatcttcgccgaaggcgagagcttagtgaaa
cagctcaaagaaggtgcctctgatcagccggcgatcatccgtattggccatgcctcgacc
atgtcgcgtaactttgttgaagcttttattaatgatctggttagccaaaaagaggtgcac
tatcggctgcattcgatgaccccggatcagttgtttaatgaactggccaatcaccaaatt
gacatcgcgttggccaacaccaatgtgcgaggcagtgacaaacaactgtggcagagtcgt
ttgctggcacgtcagccggtgtcgctgattgggccgccgggacgggcgataaccgaactc
aattcaccggcgctggtcaagcagcattgggttttaccaccggaaaacctgtcgctgcgg
ctggcctttgacatgctcagcgcggaatacaattggcagccgattgtgctggccgaagcc
gacgatatggccatgttgcgattgctgacccgcgataccggcgcgctggcagtgattccg
gacgtggtggtaagggatgagcttaacagtggccagctaagtcgttatctgcagttgccg
aatgtctacgagcaattctatgccatcaccctgaaacggccgtttcaacacccgatggtg
gttcagttgttacagcagttcagcctttaa
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