KEGG   Idiomarina sp. OT37-5b: C5610_03125
Entry
C5610_03125       CDS       T05379                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
idt  Idiomarina sp. OT37-5b
Pathway
idt02020  Two-component system
idt02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:idt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C5610_03125
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C5610_03125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:idt03021]
    C5610_03125
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:idt02035]
    C5610_03125
Transcription machinery [BR:idt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C5610_03125
Bacterial motility proteins [BR:idt02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    C5610_03125
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 GerE
Other DBs
NCBI-ProteinID: AVJ55387
LinkDB
Position
694151..694876
AA seq 241 aa
MNKAAVYSAHADNRQAIIEKHTGLVKRIAHHMMARLPASVQIDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRRGDWAPRSVHRNHRRVLEAIRQVENETGRDAKDVE
VAAQLELSLDEYHAILRDVNSGRIIGIEDLGVSEDAIIPEQVTGAHYEPQRDVENDAFHR
ALAETISSLPEREALVLSLYYDEELNLKEIGEVLSVSESRVSQIHSQAMLRLKSRMQSWV
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaataaagcagctgtgtacagtgcgcatgccgacaaccgtcaggccattatcgagaag
cataccggtctggttaagcgcattgcgcaccacatgatggcgcgattgccggccagtgtg
caaatcgacgacctgatccagtcgggcatgattggtttactggaagcggcacgaaatttt
gacggcagcaaaggggccagctttgaaacctttgccggcattcgtattcgcggtgcgatg
cttgacgaaattcgccggggagactgggcgccgcgctccgtacaccgaaaccatcggcgg
gtactggaagccattcggcaggttgagaacgaaaccggccgtgatgccaaagacgtagaa
gtagcggcacaattggagctgtcgctggacgagtatcatgctatcttgcgtgatgtaaac
tcgggacgcatcatcggtattgaagacctcggggtgtcagaagatgcgatcatacccgag
caggtaaccggcgcgcattacgagccgcaacgggatgtcgagaacgatgcctttcatcgg
gcgttggctgaaaccatttcgtcattacctgaacgtgaagctttggtgctttcgttgtat
tatgatgaagaactgaacttaaaagagattggcgaagtactcagtgtgagtgaatcgcga
gtcagtcaaattcatagtcaagccatgctgcgccttaagtcgcgtatgcagagttgggtt
gaataa

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