Idiomarina sp. OT37-5b: C5610_03890
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Entry
C5610_03890 CDS
T05379
Name
(GenBank) signal protein
Organism
idt
Idiomarina sp. OT37-5b
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS
Y_Y_Y
PAS_4
PAS_8
PAS_11
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AVJ57285
LinkDB
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Position
complement(864714..868448)
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AA seq
1244 aa
AA seq
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MWIATRNGLQRFDGVSFEHFMTGRQPHQLPSNNILDLWFNDKQLWVSTARGVAYFDYQQN
RFYRHPKFDNVNGPQPPIVNKIIADFNDNLLFLSESRLWRVDTKTATPVTLSYNGDTLTN
ITNIHMGKRWIWLSEQDGSLYVWDGNSFDVFKVSQQNPITDPLPATGFNHILQRADRIYF
AHDRGLFILDDDFRLLQQLDNATDLDNSTPISSLAYVDNGHLLLGTSQGIKILETFSRQP
AYLSRQHSLSLPPLLQVNAFTVDHLQRLWVGAGNGGLYQFSKPRSALNFEKLLDIRLSNE
LNTLSLPSTLNDYTSATKDYEGFWWFTNELGLLKYEPEQQQIKEVHPLPLTQPPNVMQTE
LFAEHLFVVDQKHGLLIFDIAEKRWRRMPDNQAFFEQENLRIAVHDSKIWIADKHNAVAV
DEFFRVVEQVPLSRGGSNDELKPLFVTTEFEQQTLYLDFVSPLAPEPERMQYRFRLFDLM
DEWQHTSRPLQPISFNHLPAGSYTLQIQASVDGNDWAIRHQQDISVSGPWWQSSWAYGVY
ALLVAGLLLLSGRWFVHLCRQRDQLSASHQHLAQAVESSGAQLWEWHLSEGELIRHNIWR
HCPAFPIDGIRCGYAGSAANIHPQDLKRVKEEFSAIVDGSKDMFECSYRLDNQGQWLWIM
DRGKVTERDEQGKPRRVQGAITDISGMISSEERLNMLALSLTNISDGICIFDRFFRKREI
NKAFETITGYSREQILEQPFTLQAYEQNFIDQIKRDVFKEGSWRGEVTDIRADGSEFQME
LTLDTVNNDNGDIELIVASFSDVTERRNTENELRRLSNTDSLTGLPNRSYFQVSHSNLVR
KKVPHALLIFDLDDFKKINDSLGHEVGDELLCRVAERLTDIGRRQDTLYRLGGDEFGLLV
EDTTEINAISVLASKINTEIAVPFNIQQHEVVIGSSIGIVLYPHDGHTSQELLQKADTAM
YHAKQRGGNCYQFFSQSMNENAIRRLQIENELRSAIREQRVEVFYQPKIELASQHIAGIE
ALARIRREDGTVISPADFIPLAEETGLIVPLSEQVLRQSCRDMKTFLKLAGAPRHVAINL
SARQFSTSSLAFQVESILAEENMHPRHIEFEITEGMVMADPERAITMLENLADMGVQLAL
DDFGTGYSSLAYLKRFPLHTLKIDKAFVDDITTDDKDRNMVASIVGMAHNLGLKVVAEGV
ESRTQLEILKTLRCEYIQGFYYAEPMQADAFIRYIGQHQEQPSL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
ttgtggatagccactcgcaatggcctgcaacgctttgacggtgtctcgttcgaacatttt
atgaccggccggcaaccgcaccaactgccgagcaacaacattctcgatctgtggtttaac
gacaagcaattatgggtttctacggcacggggtgtggcttattttgactatcagcagaac
cgcttctaccgccaccctaaatttgacaacgttaacggcccacaaccaccgatcgttaac
aaaatcatcgctgactttaatgacaacttgctgtttttatcggaaagtcgtttatggcgg
gtggataccaaaacagccacgcccgtcacactgtcctacaacggcgatacgctgaccaat
atcaccaatatccacatgggcaaacgctggatctggttgagtgagcaggatggcagcctg
tatgtctgggacggcaacagctttgatgtgttcaaagtcagtcagcaaaacccgatcact
gacccgttgccggccacgggcttcaatcacatcttacagcgtgctgatcggatttatttc
gctcatgatcggggactgttcattcttgacgacgattttcgactgttgcaacaactggac
aatgccaccgatcttgataacagcacgcccatcagcagtttagcctatgtcgataacggc
catctgttactgggtaccagtcagggcataaaaatactggaaacgttctcgcgccagccg
gcctatctcagccgtcagcattcgttatctctgccccctttactgcaggttaatgccttt
acggttgatcacctgcaacggctctgggtcggtgccggcaacgggggcttgtaccaattt
tcgaaaccgcggtcggcactcaactttgaaaagctactggatattcgtttgagcaatgag
ctgaataccctgtcgttgccgtcgacactgaacgactataccagcgcgaccaaggactat
gagggattctggtggtttaccaatgaactgggattgctgaagtacgagcctgaacaacag
cagattaaagaagtacatccccttcctctgacacagccacccaatgtgatgcaaacggaa
ctgttcgccgaacatctgtttgtggtcgaccagaagcatggtttgctgatctttgatatc
gctgaaaagcgctggcggcggatgcccgataatcaggctttcttcgaacaggaaaaccta
cgtatcgccgtacacgacagtaaaatttggatagccgataagcataatgccgttgcggtg
gatgagttcttccgcgtcgttgagcaggtgccactgtcccggggcggcagcaatgacgaa
ctcaaaccgctgtttgttaccaccgagttcgagcaacaaacattgtacctggactttgtc
agtccattggctccggaaccggagcgtatgcagtaccggtttcgcttattcgacttaatg
gatgagtggcaacacacatcgcgcccgttacagccaatttcatttaaccatttaccagcc
ggttcatacacgcttcagattcaggcatccgttgacggtaatgattgggccattcgccac
caacaagatatcagtgtcagcggcccctggtggcaaagcagttgggcttacggcgtttat
gcattattggtggccggattactgctgctaagcggacgctggtttgtgcatttatgccgg
caacgtgaccaactgtcagccagccaccaacacctggcacaagcggtagaaagctccggt
gcgcaactgtgggaatggcatcttagcgagggcgagttaattcgtcacaacatctggcgc
cactgcccagccttccctatcgatggcattcgctgtggttatgcgggttccgctgccaat
atccatccgcaggatctcaagcgcgtcaaagaagaattcagtgccatcgtcgacggcagt
aaagacatgtttgagtgcagctaccggctggacaaccagggtcagtggctgtggattatg
gatcgcggcaaagttaccgagcgcgatgaacagggtaaacctcgccgggtgcaaggcgcc
atcactgacatcagcggcatgataagcagtgaagaacgcctgaatatgctggctttgtca
ctcacgaacatctccgacggcatttgtatttttgaccgctttttccgcaaacgtgagatc
aataaagcctttgaaaccatcaccggctacagtcgcgaacagatactggagcaacctttt
acgctgcaggcttatgagcaaaactttatcgatcaaattaaacgtgacgtgtttaaagaa
ggcagttggcgtggcgaagtgaccgatattcgtgccgacggcagcgagtttcagatggaa
ctgacgttggataccgtcaacaacgacaatggcgatatcgaacttatcgtcgccagtttc
tcggacgttaccgaacgccgcaacaccgaaaacgaattgcgccggctgtccaataccgac
agtctcacggggctgcccaaccgttcctactttcaggtcagtcactcaaacctggtgcgc
aagaaagtaccgcatgcgctactcatttttgacctcgacgactttaaaaagattaatgac
tcgctcggccatgaagtcggtgatgagctgttgtgccgggtggccgaacgattaaccgac
attggccggcgtcaggacaccctctaccggcttggcggcgatgagtttggcttgctggtt
gaagacaccacagaaatcaacgccatcagtgtgctggcctcgaaaattaataccgaaatc
gcagtaccctttaacatccagcagcacgaagtggtgatcggcagttccatcggtattgtg
ctctaccctcacgacggtcacacctctcaggaactgttacaaaaggctgataccgcgatg
tatcatgccaaacaacgcggcggcaactgctaccagtttttcagccaatccatgaacgaa
aatgcgattcgtcgcctgcaaatcgaaaacgagttgcgcagcgccatacgtgagcagcgc
gtggaagtgttctatcagccgaaaatcgaactggccagtcagcatattgccggcattgag
gcgctggcacgaatacgccgtgaagatggcaccgtaatcagcccagccgactttattccg
ctggctgaggaaaccggtttgatcgtgccgttgagcgagcaggtgttgcggcagtcctgc
cgcgacatgaaaacctttctgaagctggccggcgcaccgcgtcacgtagcgatcaacctg
tcggcacgccagttctctacctccagcctggcgtttcaggtcgagtcgatacttgcagaa
gaaaatatgcacccacgccatatcgagttcgaaatcactgaagggatggttatggctgat
ccggaacgagccattaccatgctggaaaaccttgcggatatgggcgtgcaactggcgctg
gacgattttggtaccggttattcatcgctggcttatttaaagcgcttcccgctgcacacc
ctgaaaattgataaagcctttgtcgatgacatcaccactgatgacaaggatcgcaacatg
gttgcatcgattgtcggaatggcacataacctgggcttaaaagtggttgctgaaggggtt
gagtcgcgcacccaactggagatcttaaaaactctgcggtgtgagtatattcagggcttt
tactatgccgaaccgatgcaagcggatgcgttcatccgctacatcgggcaacatcaggag
caaccgtcgctttag
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