Idiomarina sp. OT37-5b: C5610_04045
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Entry
C5610_04045 CDS
T05379
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_04045
Enzymes [BR:
idt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C5610_04045
Transfer RNA biogenesis [BR:
idt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C5610_04045
Prokaryotic type
C5610_04045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVJ55547
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All DBs
Position
905410..906369
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AA seq
319 aa
AA seq
DB search
MGKARPRKGRPVSGVVLLNKAKGMSSNHALQRVKRLYNAQKAGHTGALDPLATGLLPVCL
GEATKFSQYLLDADKAYRVVAKLGIRTTTSDAEGDVVATAEVTVTEAQVRDVLPTFIGEQ
QQTPSIYSALKYEGRPLYYYARRGIDVPRKTRTIHIHQIDFIALKGDELELQVSCSKGTY
IRTLIDDLGQVLGCGAHVALLHRNGVAELDAEQMLTLEQLEQRDSDAELDALLQPVDCLL
SALPQQRIVRQQARALLHGQPVANHTDLAEVGDECRMVAQRIDGGDAFIGVAALRKDGQF
WPKRVLALAFCDLQLDDLQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagcaagaccccgtaaagggcgtcctgttagcggtgtggtgctgttaaataaa
gcgaagggcatgagttcaaatcatgcccttcagcgtgttaagcgcctgtacaacgcacag
aaagccggtcacaccggcgcattggacccgctggcaaccggcttattgccggtctgtttg
ggcgaggccaccaaattttcgcagtatttgttggacgccgataaagcgtatcgggtggtc
gccaaattaggcatcagaaccaccaccagtgacgctgaaggtgacgtagtagcgacagct
gaggtgacggttaccgaagcgcaggtacgtgacgtgttaccgacgtttatcggtgagcaa
caacaaacaccgtcgatttattcggcgctaaagtacgaagggcgaccgctgtattattat
gcccgccgtggcattgacgtcccccgtaaaacccgcactattcacatccaccagattgac
tttatcgccctcaaaggcgatgaactggagttgcaggtgagttgttcgaaagggacctat
attcgaaccctgattgacgatctgggtcaggtattggggtgcggtgctcatgtcgcgctt
ttgcaccgtaatggtgtggccgaacttgacgcagaacagatgctgacgctggaacagttg
gaacagcgagacagcgacgctgaactcgatgccttgttgcagccggtggattgcctgttg
tcggcgttgccgcaacaacgcattgttcggcaacaagcacgggcattactgcacggccag
ccggttgccaatcacaccgacttagctgaagtgggtgatgaatgccgaatggtggcgcaa
cggattgacggtggtgatgccttcattggtgtggcggcgttacggaaagacggacagttt
tggccaaagcgggtactggcgttggcattttgcgatttacagctggatgatttgcagtaa
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