Idiomarina sp. OT37-5b: C5610_04500
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Entry
C5610_04500 CDS
T05379
Name
(GenBank) histone
KO
K03746
DNA-binding protein H-NS
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
idt03036
]
C5610_04500
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_04500
Chromosome and associated proteins [BR:
idt03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
C5610_04500
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C5610_04500
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Phage_holin_6_1
PYRIN
DUF5713
UPF0242
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
AVJ55632
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Position
complement(984137..984550)
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AA seq
137 aa
AA seq
DB search
MSDFINIISHERRLNAALKELSISELKDIQTKLDNVVKKREQEEAELEQERQKKKEKIAE
LKRTMQEAGIDISDILEEEIGGEVLKKTKQKRAPKPPKYEFTDENGERKTWTGQGRMPKA
LQKAVDNGRPLQDFLIR
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactttattaacattattagtcacgaacgccgtttaaatgccgcacttaaagaa
ttaagcatcagtgagttaaaggatattcagaccaaactggataatgttgttaagaaacgc
gaacaagaagaagcggaattggaacaagagcggcaaaagaaaaaagaaaaaattgctgag
ttaaaacgcactatgcaagaagccggtattgatatctcggatattctggaagaggaaatc
ggcggcgaagtattgaaaaagacaaagcagaaacgtgcaccaaagccaccgaagtatgaa
tttactgacgaaaatggtgagcgtaagacttggacgggtcaaggccggatgccgaaagcg
ttacaaaaagccgttgacaatggtcgtccattgcaagactttctgatacgctaa
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