Idiomarina sp. OT37-5b: C5610_04865
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Entry
C5610_04865 CDS
T05379
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5610_04865 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
idt01007
]
C5610_04865 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_04865 (lysS)
Enzymes [BR:
idt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C5610_04865 (lysS)
Amino acid related enzymes [BR:
idt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C5610_04865 (lysS)
Transfer RNA biogenesis [BR:
idt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C5610_04865 (lysS)
Prokaryotic type
Other AARSs
C5610_04865 (lysS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
AVJ55702
LinkDB
All DBs
Position
1058035..1059546
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AA seq
503 aa
AA seq
DB search
MTDKSQSPDVDVNEQIAQRKAKLAALRDKGIAFPNDFRRDSLASDLQQEYGEATKEELEA
QGIRVKVAGRMMTRRIMGKASFATIQDMSGRIQLYVARDNLPEGFYNSEFKKWDLGDIVG
ASGVLFKTNTGELSVQVDDVRLLTKALRPLPDKFHGLADQETRYRQRYLDLITNDESRKT
FLVRSKVIEYIRRFLTERAFLEVETPMMQTIPGGASARPFSTHHNALDMELFLRIAPELY
LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWGYADYHDLMDLTEQMLRGVAE
SVLGSTTFTSQGVEYDFGQPFERMTVLEAILKYMPELTLEQLQSRESAVQVAEEVGIEVQ
PGWGLGKIQIEIFEEVAEHKLIQPTFITAYPAEVSPLARRNDDDPFVTDRFEFFAGGREL
ANGFSELNDAEDQAQRFREQVEAKEAGDDEAMFYDEDYVTALEHGMPPTAGEGIGIDRLV
MLLTDSPSIRDVLLFPHMRPKAD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaatcgcaatcacccgacgtcgacgtgaatgagcaaatagcacagcgaaaa
gctaaactggcggcgcttcgtgataagggcattgcgtttcctaatgatttccgtcgcgac
tctctggccagcgatttacagcaggaatatggtgaggcgacgaaagaagaactcgaagcg
cagggtattcgggtaaaagttgccggtcgtatgatgacccgccgtattatgggtaaagcc
agctttgccacgattcaggacatgagtggccgtattcagctgtatgtggctcgtgacaac
ctgcccgaaggtttttataacagcgaatttaaaaaatgggatctgggcgacatcgtcggt
gccagcggcgtcttgtttaaaaccaacaccggtgagctgagtgtacaggttgacgacgtt
cgtctattgaccaaagcgctgcgtccattgccggataaattccatggcttggccgatcag
gaaacgcgttaccgtcagcgttatctggatttaatcaccaacgacgagtctcgtaagacg
ttcctggttcgctcgaaagtgatcgaatacatccgtcgctttttaaccgagcgggcgttt
ttagaagttgaaacaccgatgatgcaaaccattcccggtggcgcttcggcgcgtccgttc
agcacccatcacaacgcgctggatatggaactgttcctgcgtatcgcaccggaattgtat
ctgaagcgtttggttgtcggcggttttgaaaaagtgttcgaaattaaccgcaacttccgt
aacgaagggttgtcgactcgccataatccagaattcaccatgctggaattctactggggt
tatgccgattaccacgacctgatggatctgacggagcaaatgttacgcggcgtagccgag
tcagtgctgggctcgaccaccttcaccagtcagggtgttgagtatgactttggccagccg
ttcgaacggatgacggtactggaagccattctcaagtatatgccggagctgaccctggag
cagttgcaaagccgtgaatcggcggtgcaggttgccgaggaagttggtatcgaggtacag
ccaggctggggtttgggtaagatccagatcgaaattttcgaagaggtggccgaacacaag
ctgatccagccgacctttatcaccgcttacccggctgaagtgtcgccgctggcgcgccgt
aacgacgacgacccgtttgtgacggatcggtttgagttcttcgccggtggccgtgagctg
gccaatgggttctcagagcttaacgatgctgaagaccaggcgcagcgtttccgtgaacaa
gtggaagcgaaagaagccggtgatgatgaagccatgttctacgacgaagactacgtgacc
gcactggagcacggcatgccgccaaccgccggtgaaggtatcggtatcgaccgattggtg
atgctactgaccgattcgccatcgattcgtgacgtacttctgttcccgcacatgcgcccg
aaggccgattag
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