Idiomarina sp. OT37-5b: C5610_05070
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Entry
C5610_05070 CDS
T05379
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_05070
Enzymes [BR:
idt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C5610_05070
Transfer RNA biogenesis [BR:
idt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C5610_05070
Prokaryotic type
C5610_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Lentiviral_Tat
Motif
Other DBs
NCBI-ProteinID:
AVJ55742
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All DBs
Position
1095360..1096424
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AA seq
354 aa
AA seq
DB search
MSASLENLQLQWPTLNAQRTSARFKHTAEDFQVREELAVDDEGEGEHQWLWIKKTDANTR
FVAEQLAKFANVHPRQVSYSGLKDRKAVTWQWFSVQLPGKALLNWSDLALDGVEVERVIQ
RSKKLKLGFHKANRFTIRLRDVADKALFERNWQHLCEQGTLNYFGAQRFGFDGNNLHEGR
RWLSAESPRKIARNKRSLWLSALRSYLFNQLAAARWQTHEFKPLDGDCVMLQGSQSVFIA
DNWDDELLSRLAQGDVQLTCAMPGEDGPGKVEGAAAAAEQQWLAPYQQWLDDFAKVRLKA
SRRPLRLFLQAPQLHWQGDDATIDFALPTGSFATTCINELIDLAVTENDENSVE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtcacttgaaaaccttcaactgcagtggccaaccctgaacgcgcagcggacc
agcgctcgctttaagcacaccgccgaagacttccaggtacgtgaagaactggcggtggac
gacgagggtgagggtgaacatcaatggctgtggatcaaaaaaaccgacgccaacacccgc
tttgttgcggagcaactggcaaagtttgccaacgttcacccgcgccaggtcagttattcc
gggctgaaggaccgcaaagccgttacctggcagtggttctcggtacaattgccgggcaaa
gcgctcctcaactggagcgatcttgcgctcgacggcgtcgaggtggagcgcgtgattcaa
cgcagcaaaaagttgaaactgggcttccacaaagccaaccgctttaccattcgtctgcgt
gatgttgccgacaaggcgttgtttgaacgcaattggcagcacctgtgcgaacagggtacg
ctgaattatttcggcgctcagcgttttggttttgacggcaataacctgcacgaagggcgc
cgttggctaagcgctgaatcaccgcgcaaaattgcccgcaataagcgcagtctgtggctg
tccgcgttgcgctcgtatttattcaaccaactggctgcagcgcgctggcagacacatgaa
tttaagccgttggacggtgactgtgtcatgttacagggctcgcagtcggtctttattgcc
gataactgggacgatgaattgctgagccggttggcgcagggcgacgtgcaattaacctgt
gcgatgcccggcgaagacggtcccggtaaagttgagggcgcggctgccgctgctgagcag
cagtggctggcgccgtatcagcaatggttggacgattttgccaaagtccgtctaaaagca
tcacgacggccgttgcgactgtttctgcaggcgccccaattgcactggcaaggggatgat
gcaaccatagactttgccttaccgaccggcagctttgcgacaacctgtattaatgaactc
attgatttagcggtgactgaaaatgatgaaaattctgttgagtaa
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