Idiomarina sp. OT37-5b: C5610_06540
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Entry
C5610_06540 CDS
T05379
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idt03032
]
C5610_06540
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_06540
Enzymes [BR:
idt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C5610_06540
DNA replication proteins [BR:
idt03032
]
Prokaryotic type
DNA Topoisomerases
C5610_06540
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C5610_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVJ55995
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Position
complement(1402478..1405099)
Genome browser
AA seq
873 aa
AA seq
DB search
MSDLAREVSPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMEKIAHQLLADLDKETVDFVDNYDGTERIPDVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLNEVINGTLALIENPDITIDELMEYIPGPDFPTAASISGRSGIIEAYKTGRGRI
HLRAKAEVEVDEKSGRESIIVTEIPYQVNKARLIEKIAELVKEKRLEGISGLRDESDKDG
MRIVIEIRRGDVAEVVLNHLYANTQMQVVFGINMVALDKGQPRLFNLYDMLNAFVRHRRE
VVTRRSVYELRKARERAHILEGLAIALANIDEVIELIRRSPTPAEAKAGLTSRSWQLGNV
ASMLEATGVDAARPDHLPEEYGIRDGNYYLTEEQAQAILDLRLHKLTGLEHEKILEEYKG
ILDQIAELLHILRSSERLMEVICEELIEIRNNFGDERRTEITAATHDISMEDLINEEDVV
LTLSHEGYVKYQPLTEYEAQRRGGKGKAATKMKDEDFIERLWVANTHDTILCFSTYGRIY
WMKVYQLPLASRASRGKPIVNLLPLESDERITAILPTRDYPEDKFVIMATKNGTVKKTPL
PEYSRPRNGGIIALNLNEGDELIGVDITDGEQEIMLFSDAGKVVRFREDQVRSMGRTATG
VRGIRLEEGQRVVSLIVPRSYEDQEAAILTVTENGYGKRTPVGDYPTKSRATKGVVSIKV
SERNGSVVGAMEVIDGNEIMLISNKGTLVRTRVNEVSVVGRNTQGVRLIRTGDDEQVVGL
QRIDEMDVDDELDGELDAENSASSETNEGESNE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgccagagaagtatcacccgtcaatattgaggatgagcttaagagctcc
taccttgactacgcgatgagtgtgattgtcggccgtgcgttaccggatgtacgcgacggc
ttaaaaccggttcaccgtcgcgtgttgttcgcgatgaacgaattgcgcaacgactttaac
aaaccatataaaaaatcagcgcgtgtggtcggtgacgttatcggtaaatatcacccacac
ggtgattctgctgtttacgacaccatcgtccgtatggcgcagccattctcattacgttac
accctggttgatggtcagggtaactttggttctgtggacggtgattccgcagccgctatg
cgttacaccgaaatccgcatggaaaaaatcgcccaccagttgctggccgatttggataag
gaaaccgtcgattttgtcgataactacgacggcaccgagcgtattccggacgtgttacca
acccgtgtaccgaacttgctggtcaatggctcgtccggtatcgccgtcggtatggcgacc
aacattccgccgcacaacctgaacgaagtcatcaacggtaccctggcgttgatcgaaaac
ccggacatcaccatcgatgaactgatggagtacattccggggcctgatttcccgacggca
gcaagcatttctggtcgttcgggcatcatagaagcttataaaaccggtcgtgggcgtatt
cacttgcgcgctaaagccgaagttgaggtggatgaaaaatccggccgtgaaagcatcatt
gtgacggaaattccttaccaggtgaataaagcacggctgatcgaaaaaattgccgagctg
gtcaaagaaaaacgccttgagggcatcagcggattgcgcgatgagtcggacaaagacggt
atgcggattgtgattgaaatccgccgcggcgatgtcgctgaagtggtattaaaccactta
tacgccaacacccagatgcaggtggtgttcgggattaacatggtggcgctggataaaggt
cagccgcgcctgttcaacttatatgacatgctcaacgcgtttgttcgtcaccgtcgcgaa
gtggtaacccgtcgctcggtgtatgaattgcgtaaagcgcgtgagcgtgcacacatctta
gaaggcctggcgattgcgctggccaatatcgacgaagtgatcgaactgatccgccgctcg
ccaacaccggctgaggcaaaagcgggacttacctcacgcagttggcagttgggcaatgtc
gcgtcaatgctggaagccactggtgttgatgcagcacgtccggatcacttgccggaagag
tatggtattcgtgacggcaactattacctgaccgaagagcaggcccaggcgatcctggat
ttgcgcctgcataagctgactggcctcgaacacgaaaaaattctggaagaatataaaggc
attctcgatcaaatcgctgaattgcttcatattttgcgttcatctgagcgtctgatggaa
gtgatttgtgaggagctgattgagattcgcaataatttcggtgacgaacgtcgtaccgaa
atcaccgcagccacgcatgacatcagcatggaagacctgattaatgaagaagacgtggtg
ttgacactgtcgcacgaaggctatgtgaaataccagccgttaaccgagtatgaagcgcag
cgtcgtggcggtaaaggcaaggcggccacgaagatgaaggacgaggactttatagagcga
ctgtgggtggcgaatacccacgacaccatcctctgtttctcaacgtatggccgaatttac
tggatgaaggtttatcagttgccgctggccagccgtgcgtcccgtggtaagcccattgta
aacttgctgccgctggagtccgatgaacgcattaccgcgattttgccgacacgagactat
ccggaagacaagttcgtcattatggcgaccaaaaacggcaccgttaagaaaaccccgtta
cctgagtattcacgcccacgtaacggcggtatcatcgcgcttaatctgaacgaaggtgat
gagctgatcggtgttgatattaccgacggtgaacaggaaattatgctgttctcagacgcc
ggcaaagtggttcgctttagagaggatcaggtccgttcaatgggtcgtaccgccaccggt
gtacgtggtatacgcctggaagaagggcaacgcgtggtgtctctgattgtaccgcgtagc
tacgaagatcaggaagccgctatcctgactgtcaccgaaaatggctatggtaaacgtact
ccggtgggcgattacccaaccaaatcccgggcaaccaagggcgttgtttcgatcaaagtc
agtgagcgtaacggcagtgtggtcggcgctatggaagtgatcgacggcaacgaaatcatg
ctgatcagtaacaagggtacgctggtgcgcacccgtgttaacgaagtatcagtggttggc
cgtaatactcagggtgtgcgcttgatccgtaccggtgatgatgagcaggtggtcggtttg
caacgcattgatgagatggacgttgacgacgaactggacggcgagcttgacgctgaaaac
agtgcaagcagcgaaaccaatgaaggcgaaagcaatgagtaa
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