Idiomarina sp. OT37-5b: C5610_06590
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Entry
C5610_06590 CDS
T05379
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C5610_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_06590
Enzymes [BR:
idt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C5610_06590
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C5610_06590
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C5610_06590
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C5610_06590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_C
ExoI_SH3
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVJ56005
LinkDB
All DBs
Position
1416705..1418141
Genome browser
AA seq
478 aa
AA seq
DB search
MDASTPTFYFHDYETWGANPHIDRPAQFAGIRTDAELNPVGRALKLYAQPTPDFLPNPEA
VLVTGITPQLALNQGVNEADFARAIHQEFAQPNTTVIGYNNVRFDDEVSRTLFYRNFYDP
YEYAWQNGNSRWDLIDVTRACYALRPDGIEWPNNDDGRVSLKLEHLSKANGIDHGQAHDA
MSDVYATIGLAKLIKEQQPKLWQWAFKIRRKAALLDLFNWQQPQPLAHVSGFYGSDNRYL
SAVLPIAFHPRQNNAVIVWDLRCDPAVLDGLTTEQIIEHTYASKQQREAQGLPKLGLQLI
NLSRCPFLAPINTISSAAAAAADLDVDAINQRVQYLSSAADQRDQLVAVYEQERPFVTAD
DVDLQIYQGFFSDQDRNNMAMIRDASPQQLAGLELNTADKRLPELLFRYRARNFPATLTD
KELERWRQFCQQRMLAPPAGFLSAEAFMQRLEQLAQVHNENTHNLRLLKSLYDYAASL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcaacgccgaccttctactttcacgattacgaaacctggggtgcgaatccg
cacattgatcgcccggcacagtttgccggtatccgcaccgatgcggagttaaatccggtt
ggacgtgcacttaagctgtacgcacagcctacccccgactttctgcccaatcctgaggcg
gtactggttactggcattacgccccagttagcgttgaatcagggcgtgaacgaagccgat
tttgcccgcgctattcatcaggaatttgcccagccaaacacaacggtgatcgggtataac
aatgttcgctttgacgatgaagtatcccgcacgctgttttatcgcaatttttatgaccct
tacgaatacgcctggcaaaacggtaattcccgctgggacctgattgatgtgacgcgagcc
tgctatgcgcttcgacccgacggtattgaatggccgaataacgacgacggccgggtgagt
cttaagctggagcacctctccaaagccaatggcatcgatcacggtcaggctcacgatgcc
atgtctgacgtgtatgcgaccattggtctggcgaagctgattaaagagcaacagccgaaa
ttgtggcagtgggcgtttaaaattcggcgcaaagccgcactgctggatctgttcaattgg
cagcagcctcaaccgctggctcatgtcagtggtttttatggcagcgataaccgttattta
agtgccgtgctgccaattgcctttcatccgcgccagaacaatgcggtcatcgtatgggat
ttacgctgtgaccccgccgtactggatggtttgacgacggagcaaatcatcgaacacacc
tacgccagcaagcagcaacgcgaggctcaggggttgccaaaacttgggctacaactgatt
aacctgagccgctgtccgttcctggcgccgataaacaccatttcctccgcggcagcggcc
gcggcggatttggatgttgatgccatcaatcagcgggtgcaatatttgagttcggcggcg
gatcaacgtgaccaattggttgcggtgtacgaacaggaacgtccgtttgttacggcggac
gacgtcgacttgcaaatttatcagggctttttcagtgatcaggatcgcaataacatggcc
atgatccgggacgccagcccgcagcaactggcggggctggagctgaataccgccgacaaa
cgtttaccggagttattgttccgctatcgcgcgcgtaatttcccggcaaccctgaccgac
aaagagctcgagcgttggcgtcagttttgtcagcagcggatgctggcaccgccggcaggc
tttttatccgctgaagcctttatgcagcgactggagcaactcgcgcaggtgcacaacgaa
aatacccataacttacggctgttaaaatcgttgtacgactatgcggcttcgctgtga
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