Idiomarina sp. OT37-5b: C5610_06715
Help
Entry
C5610_06715 CDS
T05379
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5610_06715
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
idt01007
]
C5610_06715
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_06715
Enzymes [BR:
idt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
C5610_06715
Amino acid related enzymes [BR:
idt01007
]
Aminoacyl-tRNA synthetase
Class II (U)
C5610_06715
Transfer RNA biogenesis [BR:
idt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C5610_06715
Prokaryotic type
C5610_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
PhetRS_B1
DUF2922
tRNA_Me_trans_C
DUF4439
Motif
Other DBs
NCBI-ProteinID:
AVJ56029
LinkDB
All DBs
Position
complement(1440063..1442450)
Genome browser
AA seq
795 aa
AA seq
DB search
MKFSEQWLREWVNPAIDSNELSEQLSMAGLEVDGVEPVAADFHTVVVGEVVECGPHPDAD
KLQVTKVDTNDGELLDIVCGAPNCRQGLKVVVAKVGAVLPGDFKIKKAKLRGQPSHGMLC
SFKELGLIDDHEGIIELPADAPVGKDYREYLGLDDNSIDIDLTPNRGDCLSIRGIAREVG
VLNRMDVKQPQISAVEASISDQKAITLAAPEQCPRYLGRVIKGIDVSRPTPIWMSEKLRR
SGIRSIDPVVDVTNYVLLELGHPMHAFDLDTLQGDITVRLAAKQEKLTLLDGEEVTLDDD
VLVIADEQKALAMAGVYGGKDSGVTLDSKNIFLESAFFAPDAILGKARRYGLHTDASHRY
ERGVDPQLQRTAMERATELLLAICGGEAGPITEAVSEQHLPARASVTLRSSRLAKVLGVQ
IADNEVTEILQRLGLEVSFANGAWQVQVPSYRFDIAIEEDLIEEVARVYGYNAIQAAAPA
AQLRMTDRKEAQISRHTLVNALVERGYQEAITYSFVDPKHQAMLFNEAAALTLPHPISIE
MSSMRVSLWPGLAGAVAHNQKRQQAVLAFVETGLRFIPDEKAENGVRQEPVLGGIRAGKA
HVEHWSEGDRAIDFYDVKGDVEALLEKTGEAHLFRFVADQHDALHPGQSAAIYKGERKVG
FIGALHPQHEKALGLNQRAFVFEIELDAIAVRRIPVAQPISRYPSIRRDLALVLDESIAA
GEVLAELENVGVKQLVGLNLFDVYQGENLPAGKRSLALSITLQDTDKTLEEAEVNELMDR
FVSKLKDEFNATLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgaacagtggttacgtgagtgggttaacccggccatcgacagcaatgag
cttagcgaacagctgagcatggctggccttgaggttgacggtgttgagccggttgcagcc
gacttccatacggtggtggtcggcgaggtggtcgagtgcggtccgcatccggacgccgat
aagttgcaggtgacaaaagtcgatactaacgacggcgagttgctggatattgtttgtggc
gcacccaattgccggcagggcttaaaagttgtggtagccaaagttggcgcggtgttgccg
ggtgatttcaagattaaaaaagcgaaactgcgtggccagccgtcgcacggtatgttgtgc
tcattcaaagagctgggcttgattgatgatcacgaaggcatcattgagttaccggcggat
gcaccggtcggtaaggactaccgcgaataccttggccttgacgacaacagcattgatatt
gatttgaccccgaaccgtggtgattgtttaagcattcgcggtatcgcccgtgaggtgggt
gtgctcaatcgtatggatgttaagcaaccgcaaatcagcgccgttgaagcctccatcagc
gatcaaaaagcgattaccttggccgctcctgagcagtgtcctcgctacttgggtcgggtg
attaaaggcattgacgtcagccgcccaacgccgatctggatgagcgaaaaattacgccgc
agtggtattcgcagcatcgatccggtcgttgacgtaacgaattatgtgttgttagagctc
ggtcatccgatgcacgcgttcgacctggacaccctgcagggtgacattactgttcgtctt
gcggcaaagcaggaaaagctgacgttactggacggtgaggaagtcacgctggatgacgat
gtcctggtgattgctgatgagcaaaaagcactggctatggccggcgtttatggcggtaaa
gacagtggcgtgacattagacagcaaaaacattttcttagaaagcgcgttttttgcaccg
gatgcgattttgggtaaagcccgtcgctatggtctgcacaccgacgcgtcacaccgttat
gagcgcggtgttgacccacagttacaacgcacggcgatggagcgcgcaacggaattactg
ttggcgatttgcggtggtgaagcgggtcccattaccgaagcggtatccgagcagcattta
cccgcgcgcgccagtgtaaccttacgcagctcgcgtttggccaaggtcctgggcgtacag
attgccgataatgaggtaaccgaaatcctccagcgtctggggcttgaagtcagctttgcg
aacggcgcatggcaggttcaggtgccgtcgtatcgttttgacattgccattgaagaagat
cttatcgaagaagtggcacgggtatacggttataacgcgatccaagccgcagccccggct
gcacagttgcgcatgaccgaccgcaaagaagcacaaatcagtcgtcacacgctggtaaat
gcgctggtggagcgcgggtatcaggaagccattacctacagctttgttgatccgaagcat
caagccatgttgtttaacgaggccgccgcgttgaccttaccgcacccgatttcgatcgaa
atgtcatcgatgcgcgtgagcctatggcccggtcttgccggagccgttgcgcacaaccaa
aagcgtcagcaggcggtgctggctttcgttgaaacgggtttgcgctttattccggatgaa
aaagctgagaacggcgttcgtcaggagccggtgttgggcggtatccgtgcgggtaaagca
cacgttgagcattggtcagaaggcgatcgtgcgattgatttttatgacgttaaaggtgat
gtcgaggcgttgttggagaaaaccggcgaagcgcatttgttccgctttgttgctgaccag
cacgatgccttacatccggggcagtcggcggcgatttacaaaggtgaacgcaaagtcggc
ttcattggcgccttacatcctcagcacgaaaaagcattggggttaaaccaacgggcgttt
gtgtttgagattgagcttgatgcgattgctgttcgtcgcattcctgtggctcagccaata
tcccgttaccccagcattcgccgtgacttagcgctggttctggacgagtcaattgccgct
ggtgaagtgttggctgaactggaaaatgttggcgtaaaacagttagttggcctaaacttg
tttgatgtttaccaaggcgaaaatttgcctgccggcaaacgcagcctggcgttaagtatc
accttacaggataccgataagacgctggaagaagccgaagtcaacgagttgatggaccgc
ttcgtaagtaagctaaaagacgagtttaatgcaaccttgagggattaa
DBGET
integrated database retrieval system
