Idiomarina sp. OT37-5b: C5610_06955
Help
Entry
C5610_06955 CDS
T05379
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idt03009
]
C5610_06955
Enzymes [BR:
idt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C5610_06955
Ribosome biogenesis [BR:
idt03009
]
Prokaryotic type
rRNA helicases
C5610_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
UvrD-helicase
AAA_22
AAA_19
P-loop_SecA
Helicase_C_2
CMS1
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AVJ56071
LinkDB
All DBs
Position
1491035..1492426
Genome browser
AA seq
463 aa
AA seq
DB search
MSEQTPESIGFNQLSLAPALLSQLDDIGYHSMTPVQALSLPVTLANTDAVVQASTGSGKT
TAFALTLLNKLDVKNFSPQALVLCPTRELAHQVGDEIRRLAKGMANVKLLSLCGGEPARV
QINSLASGAHILVGTPGRVLDHLQQQHLELNALTTLVLDEADRMLEMGFQDSLNAIVEQL
PRARQTLLFSATYPDNIAALARRVTHRSVTINALQQQTRPDIEQRFYSLTTEADADVAVM
ALLSHHRPQNCLVFCNTKKQVNAIYDELKACKFSVLALHGELEQKDRDQAIVQFSNASAR
VLVATDVAARGLDIAELDLVINVAMAHDTDTHTHRIGRTGRAGHKGLAITLVTAQDDYKL
RLLEDHLTAPITLMPLPELSMGKPLRANMATLQISGGKKDKLRPGDIVGALTKDNVLQAT
DIGRIKVASTFAFVAVNTALASQALELIANNKIKGRRFRAKRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagacccctgaatcaatcggctttaaccagctaagcttagcgccggcgttg
ttgtcccaactggacgacattggctaccactccatgacccctgtgcaggcgctaagttta
ccggtcactctggcgaacaccgatgcggtggtacaagccagtaccggctcaggtaaaacc
accgcatttgcccttacgttactgaacaaactggatgtcaaaaatttttcgccgcaggct
ctggtgctctgccctactcgcgaactggcgcatcaggtcggtgatgagattcgtcgtctc
gccaagggcatggccaacgttaaattgctcagtttgtgcggcggcgagccggcgcgggtg
cagatcaactcgctggcctccggtgcccatattctggtcggcacgcccggtcgtgtactc
gatcaccttcaacagcagcacctggaactgaacgcgctaacgacgctggtgctggacgaa
gctgaccggatgttggaaatgggctttcaggacagtctcaacgccattgttgaacaactt
ccaagggcacggcagacgctgttattcagtgccacctatccggacaatatcgccgccctg
gcacgccgggtcacccaccgctccgtcaccattaatgcgttacagcaacagacccggccg
gacattgaacaacgcttttattcgctcaccactgaagcagatgccgatgttgccgtgatg
gcgttgctgagccaccatcggccgcaaaactgtctggttttttgtaataccaaaaagcag
gtaaatgccatttacgacgagctgaaagcgtgtaaattcagtgtcctggcgctgcatgga
gagctggagcaaaaggatcgcgatcaagccattgtgcagtttagcaacgctagcgcaagg
gtgctggtggcaaccgatgtcgccgcccgcggactggatattgctgaactggatttggtc
atcaacgttgctatggcccatgacaccgatacccatacgcaccgtatcggccgcaccggc
cgcgccggtcacaaaggtctggcgataactttggtcactgcgcaggatgattacaagtta
aggttgctggaagaccatttaacggcaccgattacactgatgccgctgcctgagctgagc
atgggtaagccgttgcgcgcgaacatggcaacactgcagataagtggcggcaagaaagac
aaattgcgcccgggtgatattgtcggcgccctgactaaggacaatgtattacaagcaacc
gatattggtcgcataaaggtcgccagtacctttgcctttgtcgccgttaacacagccctt
gcatcacaggcgcttgagcttatcgctaataataagatcaaaggccgacgttttcgcgca
aaacggctgtga
DBGET
integrated database retrieval system
