Idiomarina sp. OT37-5b: C5610_07555
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Entry
C5610_07555 CDS
T05379
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C5610_07555 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_07555 (msbA)
Enzymes [BR:
idt01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C5610_07555 (msbA)
Transporters [BR:
idt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C5610_07555 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
AAA_29
AAA_22
nSTAND3
ABC_ATPase
APS_kinase
AAA_16
AAA_25
MMR_HSR1
AAA_15
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AVJ56179
LinkDB
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Position
complement(1621167..1622912)
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AA seq
581 aa
AA seq
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MDSPSLKKKTFRRLLGYIKPYKLTFAIAILGMVGFSAIDTWFFSQIETLIDDGLGKGNSR
ILFIGGLIVPVFFVIRGLFNVASNYFLNYVGFKVVTRMRQQLFDHLMKVPVSFHDQHSTG
ELISKITYDTQQVAEATSRAVLVLVKDGAFVIGLLGLMFYQSWQLSLVFLVVGPIIAKIV
GIVSKRFRVVSSRIQTAMGNVTTTAEQMINGHKVVVMHEGQKVESKRFAAINNNTRNQNM
KLVNTRAISTSVIQFIASLSLSMVLILASFPEMLEKLSPGAFTTLLTAMIMLLRPLKQLT
NINSDFQRGIAAAASVFSVLDEPIEVDKGTLLVDRARGDIKFNHVTFAYNQHDEPALQDI
SFDLHEGKTVALVGRSGSGKSTISSLLTRFYDISDGEILLDGRNIQDYKLKCLRRQYALV
SQHVTLFNDTIANNIAYGAAGDVSREDIIKAAEQAYVTEFTDNMPNGLDTIVGENGVMLS
GGQRQRIAIARALLQDAPILILDEATSALDTESERHIQQALGALRKDRTSLVIAHRLSTI
ENADEILVMDNGRIIERGNHQQLLQQEGAYYQLYNLQFSGV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggactctccgagtttaaagaaaaaaacgtttagacgtttacttggctacattaagccc
tacaagctgaccttcgctattgccatcctgggcatggtgggtttttccgcaatcgatacc
tggttcttttcgcaaatagagaccttgattgacgatggtctcggcaagggcaattcccgc
atcttgtttatcggtggcctgattgtaccggtgttttttgtcatacgcggactgtttaat
gttgccagtaattattttctgaattacgttggttttaaagtggtcacacggatgcgtcaa
caactgtttgaccatttaatgaaagtaccggtgtcgtttcacgaccaacattccaccggt
gagctgatctcgaaaattacctatgacacgcagcaggtggccgaggcaaccagtcgtgca
gtgctggtcttagtgaaagacggcgcttttgttattggtctgctgggtttgatgttttac
caaagttggcagctatcactggtctttttggtggtggggcctatcattgcgaaaattgtt
gggattgtgtcgaagcgcttccgtgtcgtcagcagtcgcattcagaccgcaatgggtaat
gttaccaccaccgcagagcaaatgatcaatggccataaagtcgtggtcatgcatgaaggt
cagaaggttgaatcgaaacgcttcgcggcgattaataacaatactcgtaaccagaacatg
aaactggttaacacccgcgcgataagtacctctgtgattcagtttattgcctcgctgagt
ttgtcgatggtactgatcctggcaagcttcccggaaatgctggaaaagctatcgccgggc
gcctttaccacgttattaaccgcgatgatcatgttgctacgcccgttaaagcagctaacc
aatattaacagtgactttcagcgtggtattgccgcagcagccagtgtcttttcggtactg
gacgagccgatcgaagtggacaagggcaccttactggtggatcgggcgcgcggtgacatt
aaatttaatcacgttacctttgcctataatcaacacgatgaacccgcgttacaggacatc
agcttcgatctgcacgaaggcaaaaccgttgctttggtagggcgctcgggcagcggtaag
tcgacaatttcgagtttgttgacgcgtttttacgacatttcagacggtgaaattctgctc
gatggtcgcaacatccaggattacaaattgaagtgtttgcgtcgccagtatgcgctggtt
tcgcagcacgtgaccctgtttaacgacaccatcgcgaataatattgcctatggtgccgcc
ggtgacgtgtcccgggaggacatcattaaggcggccgagcaggcgtacgtgaccgaattc
accgataatatgccaaatggcctggatactatcgtgggtgaaaacggcgtcatgctctcc
ggtggacaacggcagcgaatcgcgattgcccgggcattattgcaggatgcgccaatattg
attcttgacgaagcaacctcagcgttggatacggagtccgaacggcatattcagcaagcg
ctcggagcgttgcgcaaagatcgtacgtcactggtgattgcgcaccgcttgtcgaccatc
gaaaacgccgatgaaattctggtgatggacaatggtcgtattatcgaacgcggcaatcat
cagcaattactgcagcaagaaggcgcttattatcagctgtacaacctgcaattcagcggg
gtatag
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