Idiomarina sp. OT37-5b: C5610_07780
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Entry
C5610_07780 CDS
T05379
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_07780
Enzymes [BR:
idt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C5610_07780
DNA repair and recombination proteins [BR:
idt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C5610_07780
Prokaryotic type
C5610_07780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ACAS_N
Motif
Other DBs
NCBI-ProteinID:
AVJ56220
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Position
1673367..1674824
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AA seq
485 aa
AA seq
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MPISVVWLKRDLRLHDHKPLRQAIAAGHPLLLLYVFEPAMEADQHLGLRHFRFIVESLAD
LKRQHPALSLLVRRAPVIDVLEHLHAEATIDALYSHQEIGLRYTHQRDIAVQRWCNDHQI
DWHESPSGAVIRGLSQRQHWDKHWHKVMRAKADNPPLEQAQWFVSECPSDPLPAAWQQPD
DRFQHGGATQAWATLNDFYAGRGQFYYRQLSSPLSAQHACSRLSPYLAWGNISLRQVYHT
VLRSWQRPGWRRTLTAFASRLHWHCHFIQKFESESRMEFEHLNPGYNDMPMTTGGQADEY
LRAWQAGQTGIPMVDACMRCLHQTGYINFRMRAMLVSFLTHHLAVDWRRGVTHLASLFLD
FEPGIHYAQFQMQAGVTGINTIRLYNPVKQGQEKDPDGDFIKQWCPELSTLPVAFIHQPW
ELTPMEQQLYGMELGNDYPAPIIDLKAAAKTARDRLWSWRQKAEVKAHKQRILARHVAPK
TSFTK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccaatatctgttgtttggttaaagcgcgatttgcgcctccatgatcataaacccttg
cggcaagccatcgctgccggtcacccgttgttattgctgtacgtttttgaaccggcaatg
gaagcagaccaacacctcggtttacggcatttccgttttatcgtcgaaagcctggctgac
cttaaacgccagcatcctgccctgagcttgctggtgcggcgggcgcctgtcatcgacgta
cttgagcacttgcacgccgaagccactatcgacgcgttatacagtcatcaagaaatcggt
ctgcgctatacccatcaacgcgacattgccgtccaacgttggtgcaacgaccatcagatt
gactggcacgaatcccccagcggagccgttatccgtggtcttagccaacgtcaacactgg
gacaagcattggcacaaggtgatgcgagccaaagccgataacccgccgcttgagcaggca
caatggtttgtttccgagtgtccgtccgacccattaccggcagcctggcaacaaccggat
gatcgatttcaacacggtggcgccacccaggcctgggcaacactgaacgacttttatgcg
gggcggggtcagttttattatcggcaactatccagcccgctcagtgcacaacatgcctgc
tcccgattgtccccttacctggcttggggcaatatcagtctacggcaggtttatcatacc
gtattacgttcctggcaacggccgggatggcggcggacgctaaccgcatttgcgtcgcga
ctgcactggcactgccattttatccagaagtttgaaagcgaatcacggatggaatttgag
catttaaaccccggttacaatgacatgccgatgactaccggtggtcaggccgacgagtac
ctgcgcgcatggcaagcaggtcaaaccggtatccccatggtcgatgcctgtatgcgttgt
ctgcaccagaccggatacattaactttagaatgcgtgccatgctggtcagttttctcacc
catcacttggccgtcgactggcgccgcggcgtgacgcatctggccagcctgtttctcgac
tttgaacctggcattcactacgctcagtttcaaatgcaggcgggggtcaccggcatcaat
accatacgtttgtataaccctgtaaaacaggggcaggagaaagaccccgacggcgacttt
ataaaacaatggtgtccggagctgagtacgttaccggttgcctttatccaccagccctgg
gagctaacgcctatggaacaacaactctatggcatggaactgggtaacgattaccctgct
cccattattgatcttaaagccgctgcaaaaactgcgcgtgaccgactgtggtcatggcgt
caaaaagccgaagtgaaagcccacaaacaacggatactcgcccgccatgtcgcaccgaaa
acctcatttaccaagtaa
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