Idiomarina sp. OT37-5b: C5610_09155
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Entry
C5610_09155 CDS
T05379
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03030
DNA replication
idt03430
Mismatch repair
idt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5610_09155
03430 Mismatch repair
C5610_09155
03440 Homologous recombination
C5610_09155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idt03032
]
C5610_09155
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_09155
Enzymes [BR:
idt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5610_09155
DNA replication proteins [BR:
idt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C5610_09155
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C5610_09155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_5
AAA_2
AAA_18
AAA_14
AAA_19
AAA_30
ResIII
AAA_16
nSTAND3
TsaE
PIF1
AAA_7
Rad17
SKI
AAA_28
AAA_24
Herpes_Helicase
Mg_chelatase
APS_kinase
ABC_tran
NACHT
Motif
Other DBs
NCBI-ProteinID:
AVJ56448
LinkDB
All DBs
Position
complement(1944586..1946490)
Genome browser
AA seq
634 aa
AA seq
DB search
MSYQVLARKWRPSQFNEVVGQTHVLEPLRHALENNRLHHAYLFTGTRGVGKTTIARILAK
ALNCEQGVSATPCGTCQSCREINEGRFVDLLEIDAASRTKVEDTRELLDNVQYRPSQGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVVSRCLQFNLRALTP
DLITQQLQTVLSAETIDYDAEALPLLARAARGSMRDGLSLTDQAIAQGSGAVNLQSVQQM
LGNVPRADMIGLLSKIAANDANGAFALLDEMAALVPDIGMVLAELQALLHRLALVQQLPE
LATDEEQQGGFKQLLRQLPAEVIQLYYRLVLEGRKELPHSVDDRSGVEMTLLRLLAFRPV
DGLTVDATINETDERTTATPSAVSSDAVAEVTPEPSPPARPSPSASPTAASTPPAPDTPP
ETEVAGDLSDLLQMREQLRSADRGQTDGEKKNDIEPATVEATSVTDTPVASPQAPSPVTT
TASDPEAVPNQPELTSLLPQLTPDIRLAEQVDDWSALIAAMDISGLGRQLLLNSNLVKVA
DNHWLINVAPAQQSLLSDATAESVRLALQQSLAAQGKFEFRVEEPRVPTPLMIQQHIDAY
RHQLAVEWVQNDAAVLELKQRFAAEVDESTIKAV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaggtgctggcacgaaaatggcgtccgtcacaattcaatgaagtggtagga
caaacccacgtgttagagccattgcgtcatgcgctggagaacaatcgtctgcatcacgcc
tatttgttcaccggtacgcgaggtgttgggaaaacgaccattgcgcgcattctggctaag
gcgcttaactgtgagcaaggggtttcggcgacgccttgcggaacctgtcagtcatgccgt
gaaattaacgaaggccggtttgtcgatctgttagaaatcgatgcggcgtcgcggaccaag
gtcgaagatacccgagaactgttggacaacgttcagtatcggccttctcagggtcgtttt
aaagtatatctgattgacgaagtgcatatgctctcacggcacagttttaatgcactgtta
aaaaccctggaagagccccccgagcacgtcaaatttttgctggcgacgacagacccacaa
aaattgccgattaccgtggtttcacgatgcctgcagtttaatctgcgcgcattaacgcca
gatttaatcacacaacaactgcaaacggtattatccgccgaaaccattgactacgacgct
gaggcattgccgctattggcccgcgccgcgcgagggagtatgcgggacggactcagtttg
accgaccaagccatcgcccagggcagtggtgcggttaacctgcaaagtgtgcaacaaatg
ctcggcaacgtaccgcgcgcggatatgattggcttattgagcaagatcgccgcgaacgac
gccaacggtgcgttcgcgctgcttgatgaaatggcagcgctggtgcctgatattggcatg
gtattggctgaattacaggcgttattacaccgtctggcgttagttcagcagttaccggaa
ctggcaacggatgaggagcagcagggcggctttaaacagctgttaagacaacttcctgcg
gaagtcatccaactctattatcgattggtacttgaaggccgtaaagagttaccgcacagc
gttgatgaccgtagcggtgttgagatgacgctgttacgactactggcgtttcgtccggtc
gacgggctaacggtcgatgctacgatcaacgaaacggatgagcgcacaaccgcgacaccc
tctgcggtatcctccgatgcggtcgctgaagtgactcctgagccatcgcctccagctcgc
ccatcgccgtcggcgagcccgacggcagcgtcgacaccgccagcgccggacactccgccg
gaaactgaggttgccggggacttaagtgatttattgcagatgcgagagcagttgcgttct
gctgatcgtggtcagaccgacggcgaaaaaaaaaacgacattgaaccggccacagtagag
gccacatccgtaaccgatacgcctgttgcgtcgcctcaggcaccatcaccggtaacaaca
acagcctcggatccggaggccgtaccgaatcaacctgagctcacgtcgctgttaccgcaa
ctcacccccgatattcgactcgcggagcaagtcgatgattggtcggcattaattgcggcg
atggatatcagcgggttagggcggcaattgttgttaaactcaaatttggtgaaggtcgcc
gacaaccattggctgattaatgtcgcccctgcgcagcaaagcctgctgagcgacgcgacg
gctgaatcggtgcgactggcgttgcaacaaagtctggcggcacaaggaaaatttgagttt
agggttgaagagccccgggtaccaaccccattaatgattcaacaacatatcgatgcctat
cgccatcagcttgcggtagaatgggtacagaacgatgcagcggtgctggaattaaaacag
cgctttgccgcagaagttgatgaatcaacgattaaagccgtttaa
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