Idiomarina sp. OT37-5b: C5610_09290
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Entry
C5610_09290 CDS
T05379
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_09290
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C5610_09290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
AAA_22
GvpD_P-loop
AAA_14
AAA_24
AAA_16
Rad51
ABC_tran
RecA
AAA
cobW
nSTAND3
AAA_5
NTPase_1
Zeta_toxin
Viral_helicase1
T2SSE
DUF7125
AAA_29
AAA_28
AAA_19
KdpD
AAA_18
DZR
Motif
Other DBs
NCBI-ProteinID:
AVJ56473
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Position
complement(1968646..1970013)
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AA seq
455 aa
AA seq
DB search
MAKTKTAYVCNECGADFPRWLGQCTECKAWNTLSEVRLSNPKAHPRVAERSGFAGATQAR
VQTLNEVSLEELPRFSTTFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTLCRLAEN
KKTLYVTGEESLQQVAMRAQRLSLPTDKLRMLAETSIETICQLADQEKPEVMVIDSIQVM
HLADISSAPGSVSQVRETAAFLTRYAKQHGVAIIMVGHVTKDGSLAGPKVLEHCIDCSVI
LDGSSDSRYRTLRGTKNRFGAVNELGVFAMTGSGLKEVSNPSAIFLQRGEEQGNGSVVMV
VWEGTRPLLVEIQALVDYSALANPRRVAVGLEATRLALLLAVLHRHGGLQVSDQDVFVNV
VGGVKVTETSADLALLLAIVSSFKGEPLARDLIVFGEVGLAGEIRPVPSGLERLNEAAKH
GFKKAILPLANKPKQAPEGMTVIGVKNLQEALDAI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaaaaaccgcttatgtctgcaatgaatgcggcgcagactttccccgttgg
ttggggcagtgcaccgaatgtaaggcatggaacacgctcagcgaagtgcgcttgagcaat
ccgaaagctcaccccagggttgctgagcgcagcggttttgccggtgcaacccaggcgcgg
gtgcaaacccttaacgaagtttcgctggaagagctacctcgtttcagtaccacatttaag
gagtttgaccgggtgctgggcggcggtgtggtaccgggatcggcgattttgattggcggc
tcgccgggagcagggaaaagtactctattgctacaaaccttatgccgcttggccgaaaat
aaaaagacgctgtacgttaccggcgaagagtcactgcagcaggtggcgatgcgtgctcag
cggttgtcattaccaaccgataaactcaggatgttggccgaaacgtcgatcgaaaccatt
tgtcagttggcggaccaggaaaagccggaagtaatggtgatcgactccattcaggtcatg
caccttgccgacatatcgtcggcgccgggcagcgtttcacaggtacgtgaaaccgcagct
ttcttaactcgatatgcaaaacaacacggcgtggccatcatcatggtcggtcatgtcacc
aaagacggtagcctggcgggtccgaaagtactggagcattgtatcgactgctcggtgatt
ctggacggttcatctgattcccgctaccgcaccttacgaggcaccaagaaccgctttggc
gcggttaacgagctgggcgttttcgcgatgaccggcagcggtcttaaagaagtgtctaac
ccctctgcgatcttcctgcaacggggcgaggagcagggcaatggctctgtggtcatggtc
gtttgggaaggaactcgcccactgctggtcgaaatccaggcgctggttgattattctgcg
ttggcaaatccacggcgcgtggcggtagggctggaagctacccggctggcgttgctgttg
gcggtattgcaccgccatggcggattacaggtgtccgatcaggatgtgtttgtgaacgtt
gtcggtggtgttaaggtcaccgaaacctcggccgatttggcgttgctgttggccattgtg
tcgagctttaaaggggagccgctggcgcgtgatttaattgtctttggtgaagtggggtta
gccggagaaattcgccccgttcccagtggtctggaacgcttaaatgaggcggccaaacat
ggttttaaaaaagccatactgccgctggcgaataaacccaagcaagcgcctgagggaatg
accgtaatcggcgttaaaaacctgcaagaagcattagatgcgatttag
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