Idiomarina sp. OT37-5b: C5610_10160
Help
Entry
C5610_10160 CDS
T05379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt02020
Two-component system
idt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C5610_10160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C5610_10160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
idt02022
]
C5610_10160
02035 Bacterial motility proteins [BR:
idt02035
]
C5610_10160
Two-component system [BR:
idt02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
C5610_10160
Bacterial motility proteins [BR:
idt02035
]
Flagellar system
Flagellar assembly proteins
Others
C5610_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_16
HTH_30
AAA_19
AAA_3
AAA_22
HTH_28
MCM
HTH_11
MerR
AAA_30
nSTAND3
FleQ
AAA_7
AAA_14
AAA_18
bpMoxR
TIP49
HTH_50
HTH_20
APS_kinase
NPHP3_N
DUF2089
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AVJ56619
LinkDB
All DBs
Position
complement(2145483..2146859)
Genome browser
AA seq
458 aa
AA seq
DB search
MVEAKILIVEDDAALREAIIDTLELADYCCLEADSGEAALVMLKQQPVDLIISDVQMPGI
DGLQLLRSLNNQGIDVPVIVMTAFAKVDDAVIAMREGAIDYLSKPFSTETLLKLVQRQLP
LTEQDQCSVVAEDPSSQALLEMAKKVAATDATVMITGPSGTGKEVLARYVHEQSNRKEQP
FVAINCAAIPENMLESLLFGYEKGAFTGATQATPGKFELAQGGTILLDEITEMDINLQAK
LLRVLQERQVERLGARKSIQLDVRVIATSNRDLKQAVAEGRFREDLLYRLNVFPLQWRAL
AERRKDIVPIAEALLVRHRQRLGIKQQVRFGSAAKQALEHYAWPGNIRELENVIQRALVL
QNDGEIKPQDLMLELDLDSVFPEQIADSADSNPSELPSNTETVADGLGESMFHQEYKIIK
QALQRHQGKRKPVAEELGISPRTLRYKLAKIRENGLPI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcaaaaattttaattgtcgaggatgatgcggcattgcgcgaggccatcatt
gatacattggaactggccgattattgctgtttggaagccgactccggtgaagcggcgttg
gtcatgctgaagcagcaaccggtggatctcatcatcagtgatgtacagatgccgggtatc
gatgggttgcaactgctgcgtagtttgaataatcaaggtattgatgtgccggttatcgtg
atgaccgcgtttgcgaaagtcgatgatgctgttatcgcgatgcgggaaggagccattgat
tacttaagcaaacctttctcgaccgaaaccttgttaaagcttgtgcagcgacaattaccc
ttgaccgaacaggatcagtgttcggttgttgctgaagacccatcgagccaggcattactg
gagatggcaaaaaaagtagcggcaaccgatgcgacggtgatgatcaccggccccagcggt
accggtaaggaagtgctggcgcgctacgtccatgagcaatcaaatcgcaaagagcagcct
tttgttgcaattaactgtgcagcgattcccgaaaatatgctcgagtcattgctgtttggt
tatgagaaaggggcctttaccggagcgactcaggcaacccccggtaaatttgagctagca
cagggcggaaccatcttactggacgaaataaccgagatggatattaacctgcaagcgaag
ctgttgcgggttttgcaagagcggcaggtcgaacgactgggggcaagaaaatccatccag
ttggatgtgcgggtgattgcaacttctaaccgtgatttaaagcaggcggtagctgaaggg
cgttttcgcgaggatctgctctatcgattgaacgttttcccgttgcagtggcgggctctg
gctgaacggcgcaaagacattgtgccgatcgctgaggctctgctggtaaggcatcggcag
cgtttgggaataaagcagcaggtgcgttttggaagcgcggctaaacaggcgctggagcac
tatgcttggccgggtaacattcgtgaactggagaatgttatccaacgtgctctggtattg
caaaatgatggtgaaatcaagcctcaggacctcatgctagagcttgatttagacagtgtt
tttcctgagcaaattgctgactctgcggatagtaacccatcggaactaccttcaaatact
gagacggttgcggatggcctgggcgagtctatgtttcatcaggagtataaaatcatcaaa
caggcgctccagcgtcatcagggcaaacgtaaaccggttgccgaagagcttgggatttcc
ccaagaacactgcgctacaagctggcaaagatcagagagaacggattaccgatctga
DBGET
integrated database retrieval system
