Idiomarina sp. OT37-5b: C5610_11145
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Entry
C5610_11145 CDS
T05379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
idt03000
]
C5610_11145
Transcription factors [BR:
idt03000
]
Prokaryotic type
Helix-turn-helix
Other families
C5610_11145
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
HTH_28
Sigma54_activ_2
HTH_23
Mg_chelatase
AAA_5
HTH_7
HTH_30
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AVJ57393
LinkDB
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Position
complement(2350914..2352437)
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AA seq
507 aa
AA seq
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MNVAEMKTKHADDDIARRVEYAPTLIIALHPDLGRIGDTAPLLGILQENRDYLSRNRPDF
SKNGYTGKPLNDPHISRSPIIFQQDGDDAFRVRAHSTSTKVQILGRAYQSEYLLSSAEVS
QGVVITLNNTVVLVLKMMPLEETRYNLDAVLKGISPDINAISHKLEHIAKLDMPVIIRGA
TGAGKEQAAYKIHLESHCADNPFVSVNVAAIHDVVAEEELFGVVRGDQHSPGYFCQAQGG
TLVLEDLEDASETVVSLLFSALTQGSYIPPNGNKPVTINCRIIVTSIYDTCPCPQGSKLW
QLMNYLAAYQVFLPSLAERIEDISILFLHFVEQQWQRIYPQRSFALKIPASLIAQLLSFN
WPGNVRQLRNVARQVVIDSRDEEALQLDPQLLSILKPQSSLRGVQEKIKANGSGRKPNTI
GRDELIEALQKNRFELQATARELNISRASVYQLIQRFDGIRTAQDLTEAELKECYEKYRG
DTEQMMWELQVSQVGMRRRLKAMGYDI
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgcagaaatgaaaacaaagcatgcggacgatgacattgcacgtcgagttgag
tatgcgccgacgctaattattgctcttcaccccgatttggggcgtattggcgacaccgct
ccgctgctgggtattcttcaggaaaatcgagattatttaagtcgtaaccgcccggatttt
tccaaaaacggctacaccggtaagcccctcaatgatcctcacatcagtcgttcgcccatt
attttccaacaagatggtgatgatgcctttcgcgtgcgggcgcactcgaccagtaccaaa
gtccaaattttaggacgcgcctaccaaagtgagtatttactgagctcagcggaagtcagc
caaggtgttgttattacattgaataatactgtggtactggtgctgaaaatgatgccgctg
gaagaaacccgttataacttggatgcggtgcttaaaggcatcagtccggatatcaatgcc
attagtcataaacttgaacatattgcgaaattggatatgccggtgatcattcgcggtgcc
accggagctggcaaagaacaagcggcttataaaatccatttggaaagccattgtgcggat
aacccctttgtttctgtgaacgtcgccgctatccacgacgtagtggcggaagaggaactg
tttggtgtggttcgtggcgatcaacactcgccgggttatttttgccaagcccagggtggg
acactggtattagaggatctggaagatgcctccgaaacggtggtaagtctgttgttttcg
gcattaacgcagggcagttacataccaccgaatggcaataagccggtgaccattaactgc
cgaatcattgttaccagtatttatgacacctgcccgtgtccacagggctctaagctttgg
caactgatgaactatttagccgcttatcaggtgtttttaccatcgttggcagagcgtatt
gaagacatcagcatactgtttttacactttgtggagcagcaatggcagcgcatttatcct
cagcgcagctttgcattaaagattccggcgagtttaattgcacagttactcagttttaac
tggcccggtaatgtcagacagttgcgtaatgtcgctcgtcaggttgtcattgacagtcgt
gatgaggaagcactgcagttagacccgcaactgctttccattctgaagccgcaatcatca
ttgcgcggcgtgcaggaaaaaatcaaagcaaatggcagtggacgcaagccgaataccatt
ggtcgcgatgagttgattgaagcgttgcaaaaaaatcgctttgaactacaggctaccgcg
cgtgagttgaatatttctcgggcctcggtgtatcagttgatacaacgctttgatggcatc
agaaccgcacaggacttgaccgaagcggagctgaaagagtgttatgaaaagtaccgcggg
gataccgagcagatgatgtgggagctgcaagtttcgcaggtcggaatgcggcgacgactc
aaagcaatgggttacgatatttga
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