Idiomarina sp. OT37-5b: C5610_12015
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Entry
C5610_12015 CDS
T05379
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C5610_12015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
idt03019
]
C5610_12015
03009 Ribosome biogenesis [BR:
idt03009
]
C5610_12015
Messenger RNA biogenesis [BR:
idt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C5610_12015
Ribosome biogenesis [BR:
idt03009
]
Eukaryotic type
Pre-60S particles
RNases
C5610_12015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AVJ56939
LinkDB
All DBs
Position
complement(2550997..2551563)
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AA seq
188 aa
AA seq
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MSENEKSQRLIWIDLEMTGLDPEQNHIIEIATIVTDHNLNELAQGPVIAINQPQEYLDRM
DDWNVKTHTGSGLVDRIKASEYSEQHAVQATIAFLQEWVEPNTSPMCGNSICQDRRFLAR
HMPELEAYFHYRNLDVSSLKELAKRWNPEVLNSFKKKGVHEALEDIRESIAELRHYRDNF
LKLAQPSD
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaatgagaaaagccaacgcttaatttggatcgatttggaaatgaccgggttg
gatcctgagcaaaaccatattatcgagatagcgaccatcgtaacggaccacaacctgaat
gagttggcgcaagggcctgtcattgcgattaaccagccgcaggagtaccttgatcggatg
gatgactggaacgtcaaaacacataccggctcgggcttggtggatcgcatcaaggccagt
gaatacagcgaacaacatgcggtacaagcaacgattgcgtttttgcaggaatgggttgag
ccgaataccagcccgatgtgtggtaacagcatttgccaggatcggcgttttctcgccagg
catatgccggaactggaagcgtattttcactatcgcaacctcgacgtaagcagtttaaaa
gagctggcaaaacgttggaacccggaggtgttgaacagtttcaagaagaagggtgttcat
gaggcactggaagatatccgcgaatccatcgctgaacttcgtcattatcgcgataacttt
ttaaagcttgcgcaaccgtctgactaa
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