Idiomarina sp. OT37-5b: C5610_12350
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Entry
C5610_12350 CDS
T05379
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C5610_12350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
idt03021
]
C5610_12350
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_12350
Enzymes [BR:
idt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C5610_12350
Transcription machinery [BR:
idt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C5610_12350
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C5610_12350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AVJ57002
LinkDB
All DBs
Position
complement(2623574..2623846)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVEDAVDRVGNRFDLILLAARRARQLAVQGKQPLVEVKNEKPTVIALREIEQGLID
NDRLDAEDRQAAQQADAEEMQAVNALRGVE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaaccgttgaagatgccgtagaccgcgttggcaatcgttttgatttgatt
ttattagcggcccgtcgtgcgcgccagttggcagtgcaagggaaacaacctttggttgaa
gtaaagaatgaaaagccaacggtcattgctctacgtgagattgagcagggtttgattgat
aatgatcgccttgacgcagaagaccgtcaggcggctcaacaagcagacgcagaagagatg
caggcagtgaacgcattgcgtggcgtcgaataa
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