Idiomarina sp. OT37-5b: C5610_12375
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Entry
C5610_12375 CDS
T05379
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idt03400
]
C5610_12375
DNA repair and recombination proteins [BR:
idt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C5610_12375
Archaeal homologous recombinant proteins
C5610_12375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AVJ57006
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All DBs
Position
2628780..2629922
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AA seq
380 aa
AA seq
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MRILHTSDWHLGRLFHQISLVDEQRCAIEQVLDYIKTYQPDVVIIAGDIYDRSVPPASAI
SLFDDFVDTCLSQLGVPIIAISGNHDGAERLGFASRQLATSGMYLVTTLEQMTQPIVLDD
EHGPVDFWAVPFHDPAQVADFTGEPQRDYNHAHETLVNALKKTNDRRSVLVSHCYLDGAN
ESDSERPLSMGGADRVDWQLFSDFDYTALGHLHQPQYKGRENIRYSGSLLKYSFSEQHQK
KSLTLVDMDADGNCSIQLLPIQPRNDLRVLKGTLEEILSKAKEDARSNDYVQVILTDDEA
LLNPMARVREHYPNVMELKKERFQVRQGEQLAAAGEQLKRSELDIFEDFFSQVHHQQLND
EQRQQLEAVLAQIADQERQS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctgcatacctcagactggcacttagggcggctatttcatcaaatatcgctt
gttgacgaacagcgctgcgccatagaacaagtgctcgactatatcaaaacctatcaaccg
gacgtggtaattattgccggagatatctatgaccgttcggttccgccggcatccgcaatc
tcgttgttcgatgactttgtcgatacctgtttgagccaattgggtgtaccaatcattgcc
atatccggtaatcacgacggtgccgagcgacttggctttgcttcgcgccaattggcaacg
tccggtatgtatctggtcacaacactggagcaaatgacacaaccgatcgtactcgacgat
gagcatgggcctgtcgacttttgggcggttccgtttcatgacccggctcaagtagccgat
ttcaccggcgagccacagcgcgattacaaccacgcccatgaaaccttagtgaatgcctta
aaaaagacaaatgaccgtcgttccgtgctggtcagtcattgctatttggacggtgccaac
gaatccgattcggaaaggccactctcaatgggcggtgccgaccgggttgactggcagttg
tttagcgacttcgattacacggccttggggcatttgcaccaaccacagtacaaaggccgc
gagaacattcgttacagcggctcactgctcaagtacagcttttctgaacaacatcagaag
aagtctctcaccctggtggatatggatgccgacggcaactgctcgattcagttattaccg
attcagccacgcaatgatttacgcgtattaaaaggcacgttagaggaaattctgtccaag
gctaaagaggacgcgcgcagtaacgattatgtacaggtcatcctcaccgacgatgaggca
ttgcttaacccaatggcgcgagtcagggagcactatccaaacgttatggaattgaagaaa
gagcgctttcaagtccgtcagggagagcaactggcagctgccggtgaacagctaaaacgc
agtgaactcgacatatttgaggactttttcagtcaagttcatcatcaacaacttaatgat
gaacaacgccaacaacttgaagcggtgcttgcccaaatcgccgaccaggagcgccaatca
tga
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