Idiomarina sp. OT37-5b: C5610_13335
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Entry
C5610_13335 CDS
T05379
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_13335
Transporters [BR:
idt02000
]
Other transporters
Pores ion channels [TC:
1
]
C5610_13335
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
SAM_3
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-ProteinID:
AVJ57184
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Position
2848425..2849627
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AA seq
400 aa
AA seq
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MDLEFVTAWLNKTGFEQGVIEHLAIAINIVLIVLASYVAYAVSRFFIDLAIHRLLNKAPE
RWYNALVNSGFFKRCANLAPVLVINAFIPVIFVERFETWQDPLQTAVSIYLTWIITSILT
ALANVVHIAYEYSSKAKEVPITGVIQVIKLILVLMAILITVAIIMNKSPMYLLSGFGAMT
AILMVVFRDTLMGFVAGVQLATNRMVAIDDWIQVPDSNVDGVIKEVGLITLKVENWDKTT
VYLPTYVLIHQSFKNWQGMINAGGRRMMRSIMIDLDSTSQLNDEKLTALVDTYFSQDLKS
WLEQNELSCPVSNLTAFRLYAEHYLANHPKVRQDMTHMARLLQPTPAGLPLEIYAFCEET
QWTQYEAIQSAIVEHLYSVLPEFGLKHYQYLNKALPDAGK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatttagagttcgtcactgcatggctaaacaaaacgggctttgaacaaggcgttatt
gaacacctggcgatcgctatcaatatcgtgcttattgtcttggccagctatgtcgcatat
gcggtttcacgcttctttattgatctggccatccatcgattattaaataaagcccccgag
cgctggtacaatgcgttggtcaacagtggtttcttcaaacgctgcgcaaacctggctccg
gtactggtcattaacgccttcattccggtcatcttcgttgagcgttttgaaacctggcaa
gaccctctgcaaaccgctgtcagcatttatttaacctggataatcaccagcattctaacg
gccctggctaacgtggtgcacatagcctacgaatattccagtaaagccaaagaggtgcca
ataaccggggtgattcaggttattaagctgatccttgtgctaatggccatactcatcact
gttgccatcatcatgaataagtcaccgatgtatctgctcagtggttttggtgccatgacc
gcaattttaatggtggtctttagagacactttaatgggctttgtcgccggtgtgcagctc
gccactaatcgcatggtcgcgattgatgactggattcaagtaccggattcaaatgtcgat
ggcgtgatcaaggaggtcggccttatcacgttaaaggtcgaaaattgggacaaaaccaca
gtgtacttgccgacctatgtgcttatccatcagtcctttaaaaattggcaaggcatgatc
aacgcgggtggccgccgcatgatgcgatcgatcatgattgatttggacagcacgagccaa
cttaacgatgaaaaactaacagcattagtcgatacgtatttttcgcaagaccttaagtct
tggctggagcaaaacgagctgagctgcccggtcagcaacctgacggcgtttcggttgtac
gccgaacattatcttgctaaccatcctaaggttcgccaggacatgacccatatggcgcgc
ttactacaaccaacccctgcaggattgccactagagatttatgcgttctgtgaagaaact
cagtggacgcaatacgaagccattcaatccgcgattgtcgagcacctgtattccgtgctg
ccggagttcggattaaaacactatcagtatttgaataaagcgttgcctgacgcaggcaaa
taa
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