Idiomarina sp. OT37-5b: C5610_13540
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Entry
C5610_13540 CDS
T05379
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
idt
Idiomarina sp. OT37-5b
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_13540
Transfer RNA biogenesis [BR:
idt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
C5610_13540
Prokaryotic type
Methyltransferases
C5610_13540
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
Arf
ABC_tran
AAA_28
Roc
UBM
SRPRB
MT0933_antitox
Gtr1_RagA
AAA_29
Fervidolysin_NPro-like
Motif
Other DBs
NCBI-ProteinID:
AVJ57224
LinkDB
All DBs
Position
complement(2889353..2890729)
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AA seq
458 aa
AA seq
DB search
MQTETDFNDTIVAQATPPGRGGVGIVRVSGKASKLVAEKLLGHCPKPRRAEYLPFRNTKG
ELLDEGIALYFPGPNSFTGEDVLELQGHGGPVLIDMIIKAILELPGIRPARPGEFSERAF
LNDKLDLTQAEAIADLIDTNSEQAAKAALQSLKGEFSHKIDQLVDAVIHLRMYVEAAIDF
PDEEIDFLSDGKVAGDLSDIIDQLFHIEHQARQGTLMREGMRIVIAGRPNAGKSSLLNAL
AGRESAIVTEIAGTTRDVLREHIQIDGMPLHIIDTAGLRESPDQVEQIGIERAWEEIRQA
DRVLFMVDSQQTSAIHPDDIWPEFFAQLPEDMPFTVIRNKVDLTRESIGIDEHNGIPVLH
LSAKTGHGIELLRDHLKHCVGYTTSAEGSFMARRRHLDALAKAKAHLLQGQEQLELNLAG
ELLAEELRLAQQHLNEITGEFTSDDLLGQIFGSFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgaaaccgactttaacgataccattgttgcgcaagccacacccccaggacgc
ggcggtgtcggtatcgtgcgtgtcagtggtaaagccagcaaactggttgcggagaaactg
ctcgggcattgccctaaacctcgccgagcggaatatttaccgttccgaaataccaaaggt
gaattgctggatgagggcatcgcgctttacttccccggccccaactcatttaccggggaa
gatgtgctggaactacaagggcacggtggccccgttctcattgacatgatcatcaaagca
atattggaattacccggtatacgccctgctcgtcccggcgagttcagcgaacgagcgttt
ctcaacgacaagctcgacctgacacaggcagaagccattgccgatcttattgataccaat
tcggaacaagccgcaaaagccgccttacagagcctcaaaggcgagttttctcataagatt
gaccaacttgtcgatgcggtaattcatctgcgcatgtacgttgaagcggccattgatttt
ccggacgaggaaattgatttcttatcggacgggaaagtcgccggtgaccttagcgacatc
attgatcaattgttccatatagaacatcaggctcgccagggcactctgatgcgggaaggt
atgcgtattgttatagccggacgacccaatgccggcaaatcaagtctgttgaatgcgctg
gccggccgcgaatcagccatcgtcaccgaaattgccggtaccacgcgggacgtcctgcgc
gaacacattcaaatagacggaatgcccctacatattattgataccgccggcttgcgggaa
tcaccggatcaagtcgagcaaatcggtattgaacgggcctgggaagaaattcgtcaagcc
gaccgcgtgctgtttatggtggattctcaacaaaccagcgccatacatcctgacgatatt
tggccagagtttttcgcgcagcttccggaagatatgccatttaccgtgattcgcaataag
gtcgatctgacccgcgagtccatcggtatcgacgaacataacggtattccggtgttgcac
ctctcggcaaaaaccggacacggtatcgagctattgcgtgatcacttaaaacactgtgtt
ggctacaccaccagcgcagaaggcagctttatggcgcgacgccgtcaccttgacgcactg
gcaaaagccaaagcacatctgttacagggtcaggagcaattggaactgaacctggccggt
gagttgcttgcagaagaattgcgactggcgcaacaacatctgaatgaaatcaccggagag
ttcacctctgacgatttgctcggccaaatttttggctcattctgtatcggtaaataa
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